Detailed information NTG0294109

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: DL538_RS06490
• Genome accession: NZ_CP029609
• Coordinates: 1223830..1224783 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis subsp. subtilis strain G7
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1218830..1229783

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DL538_RS06465 (DL538_06455)	argF	1220662..1221621 (+)	960	WP_014476421.1	ornithine carbamoyltransferase	-
DL538_RS06470 (DL538_06460)	yjzC	1221707..1221886 (+)	180	WP_003245356.1	YjzC family protein	-
DL538_RS06475 (DL538_06465)	yjzD	1221933..1222118 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
DL538_RS06480 (DL538_06470)	-	1222367..1223101 (+)	735	WP_033883595.1	hypothetical protein	-
DL538_RS06485 (DL538_06475)	-	1223183..1223740 (+)	558	WP_038428783.1	hypothetical protein	-
DL538_RS06490 (DL538_06480)	med	1223830..1224783 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
DL538_RS06495 (DL538_06485)	comZ	1224798..1224989 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
DL538_RS06500 (DL538_06490)	yjzB	1225019..1225258 (-)	240	WP_003232972.1	spore coat protein YjzB	-
DL538_RS06505 (DL538_06495)	fabH	1225423..1226361 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
DL538_RS06510 (DL538_06500)	fabF	1226384..1227625 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
DL538_RS06515 (DL538_06505)	yjaZ	1227701..1228486 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
DL538_RS06520 (DL538_06510)	appD	1228678..1229664 (+)	987	WP_131227309.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=294109 DL538_RS06490 WP_014476425.1 1223830..1224783(+) (med) [Bacillus subtilis subsp. subtilis strain G7]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=294109 DL538_RS06490 WP_014476425.1 1223830..1224783(+) (med) [Bacillus subtilis subsp. subtilis strain G7]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997