Detailed information NTG0293763

Bioinformatically predicted

Overview

• Name: pilX
• Type: Machinery gene
• Locus tag: DLD53_RS14685
• Genome accession: NZ_CP029569
• Coordinates: 3016386..3017216 (+)
• Length: 276 a.a.
• NCBI ID: WP_213066301.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain DA33098
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	3015254..3016344	3016386..3017216	flank	42

Gene organization within MGE regions

Location: 3015254..3017216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLD53_RS14685 (DLD53_14680)	pilX	3016386..3017216 (+)	831	WP_213066301.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 276 a.a.
• Molecular weight: 29248.16 Da
• Isoelectric Point: 4.9940

>NTDB_id=293763 DLD53_RS14685 WP_213066301.1 3016386..3017216(+) (pilX) [Acinetobacter baumannii strain DA33098]
MSYLFLSCTEKNIKGRSKETGATLIVVLIILLIVISVGVLAIRVAIVSLKVATNSQVGQLNFQSSDTPLELIVQMNPTTL
TNITNVIGAALKAHESNPGAEYNFCYKPTSTSVSFAQTRGASLLRAGSANNAVVEDGGVAGFCDLTSDYGSNRQAVVTQV
AVSIPTDAMADIPGSNLPRDINLSEGTQLPKSMLSTQRIRVITTAFLPAYASTSLETLQSDCLSTSSAKISDNFDSALTD
KQTLADCLANHNVPFSTQVQEFNYTNKLTEITAPGS

Nucleotide

• Length: 831 bp

>NTDB_id=293763 DLD53_RS14685 WP_213066301.1 3016386..3017216(+) (pilX) [Acinetobacter baumannii strain DA33098]
ATGAGTTATCTATTTTTATCGTGTACAGAGAAAAATATTAAAGGTCGATCTAAGGAAACGGGTGCCACACTTATTGTTGT
ACTTATTATTTTATTGATTGTTATTTCTGTCGGGGTTTTGGCAATAAGAGTAGCGATTGTTTCTCTAAAAGTTGCAACTA
ATAGCCAAGTTGGCCAATTAAACTTTCAATCTTCAGATACTCCGTTAGAGCTTATTGTACAGATGAACCCAACCACATTG
ACAAATATTACCAATGTGATTGGAGCAGCACTGAAAGCACATGAAAGTAACCCTGGTGCGGAATATAACTTTTGCTATAA
ACCAACTTCTACATCTGTAAGTTTTGCTCAAACTCGGGGGGCAAGTTTGCTTCGAGCTGGCAGCGCTAATAATGCTGTGG
TTGAAGATGGTGGAGTAGCAGGTTTCTGCGATTTAACAAGTGACTATGGGAGTAATCGTCAAGCGGTAGTTACTCAAGTT
GCTGTCAGTATCCCAACCGATGCCATGGCTGATATTCCGGGTTCAAATCTACCTCGGGACATAAATCTTTCCGAAGGAAC
CCAACTTCCTAAAAGCATGCTATCTACGCAACGTATCCGGGTTATTACAACAGCGTTTTTACCTGCTTATGCCTCAACTT
CTTTAGAAACTCTGCAATCTGATTGCTTAAGTACGAGTTCCGCAAAAATTAGTGACAACTTTGATAGTGCATTAACGGAT
AAGCAAACTCTAGCTGATTGTTTGGCAAACCATAATGTACCTTTTAGTACTCAAGTTCAAGAATTTAACTATACCAATAA
GCTGACTGAAATCACGGCACCAGGTTCATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilX	Acinetobacter baumannii D1279779	99.248	96.377	0.957