Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | DKK66_RS20580 | Genome accession | NZ_CP029539 |
| Coordinates | 1200578..1201006 (-) | Length | 142 a.a. |
| NCBI ID | WP_131356172.1 | Uniprot ID | A0A4P6TL91 |
| Organism | Aquitalea sp. USM4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1195578..1206006
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKK66_RS05730 (DKK66_05725) | - | 1196365..1198152 (-) | 1788 | WP_131356163.1 | PglL family O-oligosaccharyltransferase | - |
| DKK66_RS05735 (DKK66_05730) | - | 1198246..1200072 (-) | 1827 | WP_165494109.1 | PglL family O-oligosaccharyltransferase | - |
| DKK66_RS05740 (DKK66_05735) | pilA2 | 1200128..1200556 (-) | 429 | WP_131356169.1 | pilin | Machinery gene |
| DKK66_RS20580 (DKK66_05740) | pilA2 | 1200578..1201006 (-) | 429 | WP_131356172.1 | pilin | Machinery gene |
| DKK66_RS05750 (DKK66_05745) | - | 1201195..1202544 (+) | 1350 | WP_131356175.1 | adenosylmethionine--8-amino-7-oxononanoate transaminase | - |
| DKK66_RS05755 (DKK66_05750) | - | 1202674..1204212 (+) | 1539 | WP_131356177.1 | hypothetical protein | - |
| DKK66_RS05760 (DKK66_05755) | proB | 1204284..1205402 (+) | 1119 | WP_045846370.1 | glutamate 5-kinase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14895.92 Da Isoelectric Point: 8.4716
>NTDB_id=293368 DKK66_RS20580 WP_131356172.1 1200578..1201006(-) (pilA2) [Aquitalea sp. USM4]
MRRNNGFTLIELMIVVAIIGILAAIAIPAYQNYTIRAKISEGLTSADAIKSAMWDSYTTNNSWPGSNASAGIASATAFAT
KYIDSINIVSASSVSQIVVSFNASTVLSGLTVTLTPVISSGSITWSCQSNTSSTQYLPSSCR
MRRNNGFTLIELMIVVAIIGILAAIAIPAYQNYTIRAKISEGLTSADAIKSAMWDSYTTNNSWPGSNASAGIASATAFAT
KYIDSINIVSASSVSQIVVSFNASTVLSGLTVTLTPVISSGSITWSCQSNTSSTQYLPSSCR
Nucleotide
Download Length: 429 bp
>NTDB_id=293368 DKK66_RS20580 WP_131356172.1 1200578..1201006(-) (pilA2) [Aquitalea sp. USM4]
ATGCGACGCAATAACGGTTTTACCTTGATTGAACTGATGATTGTGGTAGCCATCATCGGCATTCTGGCTGCGATTGCGAT
ACCGGCGTATCAGAACTACACCATCAGGGCCAAGATTTCCGAGGGTCTGACCTCCGCCGATGCAATCAAGTCTGCGATGT
GGGATAGCTACACCACGAATAACAGTTGGCCTGGCAGTAACGCTTCAGCAGGGATTGCCTCGGCAACGGCTTTTGCCACG
AAGTACATCGACAGCATCAATATCGTGTCAGCTTCTTCGGTAAGCCAGATTGTTGTCAGTTTTAATGCAAGTACAGTGTT
AAGTGGGCTTACGGTAACGTTGACGCCTGTCATTTCGAGTGGATCCATCACTTGGTCGTGCCAGTCGAATACGTCATCAA
CCCAGTATTTACCTTCCAGTTGTCGTTAA
ATGCGACGCAATAACGGTTTTACCTTGATTGAACTGATGATTGTGGTAGCCATCATCGGCATTCTGGCTGCGATTGCGAT
ACCGGCGTATCAGAACTACACCATCAGGGCCAAGATTTCCGAGGGTCTGACCTCCGCCGATGCAATCAAGTCTGCGATGT
GGGATAGCTACACCACGAATAACAGTTGGCCTGGCAGTAACGCTTCAGCAGGGATTGCCTCGGCAACGGCTTTTGCCACG
AAGTACATCGACAGCATCAATATCGTGTCAGCTTCTTCGGTAAGCCAGATTGTTGTCAGTTTTAATGCAAGTACAGTGTT
AAGTGGGCTTACGGTAACGTTGACGCCTGTCATTTCGAGTGGATCCATCACTTGGTCGTGCCAGTCGAATACGTCATCAA
CCCAGTATTTACCTTCCAGTTGTCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
49.645 |
99.296 |
0.493 |
| comP | Acinetobacter baylyi ADP1 |
43.125 |
100 |
0.486 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
36.022 |
100 |
0.472 |
| pilA2 | Legionella pneumophila str. Paris |
46.099 |
99.296 |
0.458 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
36.527 |
100 |
0.43 |
| pilA/pilA1 | Eikenella corrodens VA1 |
39.735 |
100 |
0.423 |
| pilE | Neisseria gonorrhoeae MS11 |
37.821 |
100 |
0.415 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
37.419 |
100 |
0.408 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
37.086 |
100 |
0.394 |
| pilA | Vibrio cholerae strain A1552 |
37.086 |
100 |
0.394 |
| pilA | Vibrio cholerae C6706 |
37.086 |
100 |
0.394 |
| pilA | Pseudomonas aeruginosa PAK |
33.544 |
100 |
0.373 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
35.135 |
100 |
0.366 |