Detailed information NTG0293352

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: DKK66_RS05710
• Genome accession: NZ_CP029539
• Coordinates: 1192431..1193555 (+)
• Length: 374 a.a.
• NCBI ID: WP_131356161.1
• Uniprot ID: A0A4P6TID7
• Organism: Aquitalea sp. USM4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1187431..1198555

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DKK66_RS05690 (DKK66_05685)	-	1188712..1188963 (-)	252	WP_045846381.1	YfhL family 4Fe-4S dicluster ferredoxin	-
DKK66_RS05695 (DKK66_05690)	rsmD	1189063..1189623 (-)	561	WP_045846380.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
DKK66_RS05700 (DKK66_05695)	-	1189702..1191006 (-)	1305	WP_242673572.1	pitrilysin family protein	-
DKK66_RS05705 (DKK66_05700)	-	1190996..1192354 (-)	1359	WP_242673573.1	pitrilysin family protein	-
DKK66_RS05710 (DKK66_05705)	pilA	1192431..1193555 (+)	1125	WP_131356161.1	signal recognition particle-docking protein FtsY	Machinery gene
DKK66_RS05715 (DKK66_05710)	ftsE	1193630..1194283 (+)	654	WP_045846377.1	cell division ATP-binding protein FtsE	-
DKK66_RS05720 (DKK66_05715)	ftsX	1194280..1195188 (+)	909	WP_045846376.1	permease-like cell division protein FtsX	-
DKK66_RS05725 (DKK66_05720)	rpoH	1195381..1196244 (+)	864	WP_045846375.1	RNA polymerase sigma factor RpoH	-
DKK66_RS05730 (DKK66_05725)	-	1196365..1198152 (-)	1788	WP_131356163.1	PglL family O-oligosaccharyltransferase	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 39876.04 Da
• Isoelectric Point: 6.5170

>NTDB_id=293352 DKK66_RS05710 WP_131356161.1 1192431..1193555(+) (pilA) [Aquitalea sp. USM4]
MFSFFKKKPKPVETPVIEPQTEPTQSTAVESPVAVPENNPAPVVQAEAVAPVVASTVTAAEIPTTESAAPAKKLSWTERL
KAGLSKTRDKLGKSLAGLFGGGKIDEDLYEELETVLLTADMGMDATLHLLKDVRERVSLKGLKDGSELKGALKDSLNELI
HPLEKPLDVNGKKPFVIMMAGVNGAGKTTSIGKLAKYYQQQGKSVLLAAGDTFRAAAREQLMAWGERNNVTVIAQQGGDA
AAVCYDAIQAATARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEVILVLDANIGQNAISQVKVFDDALGL
TGLILTKLDGTAKGGVIAAIAKQRPIPLRFVGVGESIDDLRPFNSKDYVDALFD

Nucleotide

• Length: 1125 bp

>NTDB_id=293352 DKK66_RS05710 WP_131356161.1 1192431..1193555(+) (pilA) [Aquitalea sp. USM4]
ATGTTTAGTTTCTTCAAGAAAAAGCCAAAGCCGGTTGAAACCCCGGTTATCGAACCGCAAACCGAGCCGACCCAGAGCAC
GGCTGTCGAATCGCCTGTTGCCGTACCGGAAAACAATCCAGCTCCTGTCGTGCAGGCTGAAGCCGTTGCACCGGTTGTCG
CCAGCACGGTGACTGCAGCGGAAATCCCGACAACAGAAAGCGCCGCACCCGCCAAAAAACTCAGCTGGACCGAGCGCCTG
AAGGCCGGCCTTTCCAAAACCCGCGACAAGCTGGGCAAATCCTTGGCCGGCTTGTTTGGTGGCGGCAAGATTGATGAGGA
TCTGTACGAGGAGCTGGAAACCGTCCTCTTGACCGCCGACATGGGCATGGATGCCACCTTGCATCTATTAAAGGATGTGC
GCGAGCGCGTCAGCCTGAAAGGTCTGAAAGACGGCAGCGAACTGAAAGGCGCCTTGAAGGATTCGCTGAACGAGCTGATT
CACCCGCTGGAGAAGCCGCTGGATGTCAACGGCAAGAAGCCGTTTGTCATCATGATGGCCGGGGTGAATGGTGCTGGTAA
AACCACTTCCATTGGCAAACTGGCCAAGTACTACCAGCAGCAAGGCAAGAGCGTGCTGCTGGCAGCCGGCGATACCTTCC
GCGCGGCTGCGCGCGAGCAGCTGATGGCCTGGGGCGAACGCAACAACGTCACCGTGATTGCCCAGCAAGGCGGTGATGCC
GCCGCTGTTTGTTATGACGCCATCCAGGCCGCCACGGCGCGTGGCATTGATATCGTACTGGCAGATACCGCTGGCCGCTT
GCCCACCCAGTTGCACCTGATGGAAGAAATCAAGAAGGTGAAGCGCGTCATCCAGAAGGCCCTGCCGGATGCCCCGCATG
AGGTGATTCTGGTGCTGGACGCCAATATCGGCCAGAACGCCATCAGCCAGGTCAAGGTATTCGATGACGCGCTGGGCCTC
ACCGGCCTGATTCTGACCAAGCTGGATGGCACCGCCAAAGGTGGCGTGATTGCCGCCATTGCCAAGCAGCGCCCCATTCC
GCTACGGTTTGTCGGCGTGGGTGAAAGCATTGACGATTTGCGGCCGTTCAACAGCAAGGACTATGTCGACGCCTTGTTCG
ACTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (174-373)

• SRP54-type protein, helical bundle domain (SRP54_N) (89-156)

3D structure

• AlphaFold DB: A0A4P6TID7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	63.158	100	0.706