Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   EQI87_RS10030 Genome accession   NZ_CP035166
Coordinates   1934520..1935137 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM103971     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1929520..1940137
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQI87_RS10000 (EQI87_10000) yndJ 1929841..1931481 (+) 1641 WP_003231612.1 YndJ family protein -
  EQI87_RS10005 (EQI87_10005) - 1931569..1931883 (+) 315 WP_003245621.1 hypothetical protein -
  EQI87_RS10010 (EQI87_10010) pghL 1932109..1932867 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  EQI87_RS10015 (EQI87_10015) - 1932894..1933343 (-) 450 WP_003245454.1 YndM family protein -
  EQI87_RS10020 (EQI87_10020) fosB 1933551..1933970 (+) 420 WP_046381053.1 metallothiol transferase FosB -
  EQI87_RS21715 - 1933894..1934233 (+) 340 Protein_1910 hypothetical protein -
  EQI87_RS10030 (EQI87_10030) dinR/lexA 1934520..1935137 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  EQI87_RS10035 (EQI87_10035) yneA 1935287..1935604 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  EQI87_RS10040 (EQI87_10040) dinL 1935623..1936276 (+) 654 WP_014479938.1 recombinase family protein -
  EQI87_RS10045 (EQI87_10045) ynzC 1936340..1936573 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  EQI87_RS10050 (EQI87_10050) recP/tkt 1936742..1938745 (+) 2004 WP_014476936.1 transketolase Machinery gene
  EQI87_RS10055 (EQI87_10055) sirA 1938898..1939344 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  EQI87_RS10060 (EQI87_10060) yneF 1939430..1939648 (+) 219 WP_003221221.1 YneF family protein -
  EQI87_RS10065 (EQI87_10065) ynzD 1939722..1939895 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=293322 EQI87_RS10030 WP_003238209.1 1934520..1935137(-) (dinR/lexA) [Bacillus subtilis strain SRCM103971]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=293322 EQI87_RS10030 WP_003238209.1 1934520..1935137(-) (dinR/lexA) [Bacillus subtilis strain SRCM103971]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCAATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment