Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DK182_RS07830 Genome accession   NZ_CP029491
Coordinates   1618131..1618940 (-) Length   269 a.a.
NCBI ID   WP_019777039.1    Uniprot ID   -
Organism   Streptococcus sobrinus strain 10919     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1613131..1623940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK182_RS07810 (DK181_07810) - 1613199..1613576 (+) 378 WP_019777041.1 hypothetical protein -
  DK182_RS07815 (DK181_07815) - 1613838..1614386 (-) 549 WP_019769005.1 tRNA (cytidine(34)-2'-O)-methyltransferase -
  DK182_RS07820 (DK181_07820) trkA 1615022..1616371 (+) 1350 WP_109833646.1 Trk system potassium transporter TrkA -
  DK182_RS07825 (DK181_07825) - 1616382..1617821 (+) 1440 WP_019769003.1 TrkH family potassium uptake protein -
  DK182_RS07830 (DK181_07830) vicX 1618131..1618940 (-) 810 WP_019777039.1 MBL fold metallo-hydrolase Regulator
  DK182_RS07835 (DK181_07835) vicK 1618933..1620294 (-) 1362 WP_019769001.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DK182_RS07840 (DK181_07840) vicR 1620287..1620994 (-) 708 WP_002960995.1 response regulator YycF Regulator
  DK182_RS07845 (DK181_07845) - 1621220..1621984 (+) 765 WP_002960993.1 amino acid ABC transporter ATP-binding protein -
  DK182_RS07850 (DK181_07850) - 1621998..1622822 (+) 825 WP_002960992.1 transporter substrate-binding domain-containing protein -
  DK182_RS07855 (DK181_07855) - 1622838..1623545 (+) 708 WP_002960990.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30178.11 Da        Isoelectric Point: 5.5565

>NTDB_id=293223 DK182_RS07830 WP_019777039.1 1618131..1618940(-) (vicX) [Streptococcus sobrinus strain 10919]
MTNEGFKYSILASGSSGNSFYLETPKKKLLIDAGLSGKKITSLLAEIDRKPEDLDAILVTHEHKDHIYGVGVLARKYGMP
IYANEKTWQTMDAHNMIGKVDPEQKHTFERGKVMTLGDIDIESFGVSHDAIDPQFYRFMKDDKSFVMLTDTGYVSDRMAG
LIENADGYLIESNHDIEILRSGAYPWSLKQRILSDKGHLSNEDGSETMIRTIGNRTKKIYLGHLSKENNIKELAHMTMES
NLTQADFGVGHDFKVLDTSPDEATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=293223 DK182_RS07830 WP_019777039.1 1618131..1618940(-) (vicX) [Streptococcus sobrinus strain 10919]
ATGACTAATGAAGGTTTTAAATATAGTATTTTAGCATCGGGTTCCTCAGGGAACTCCTTTTACTTGGAAACGCCCAAGAA
GAAGCTCCTGATTGATGCAGGACTCTCAGGTAAGAAGATTACCAGTCTCCTTGCTGAAATTGACCGCAAGCCAGAAGATT
TGGATGCTATTTTGGTCACCCATGAGCACAAGGACCATATCTACGGTGTCGGGGTCTTGGCCCGTAAGTACGGCATGCCC
ATCTATGCCAACGAAAAGACCTGGCAGACCATGGATGCCCACAATATGATTGGTAAGGTTGACCCCGAGCAAAAGCACAC
ATTTGAGCGAGGTAAGGTCATGACCCTCGGGGACATTGATATTGAGAGCTTCGGCGTCAGCCACGATGCCATTGACCCTC
AATTCTACCGCTTTATGAAGGACGATAAGAGCTTTGTCATGCTGACGGATACAGGCTATGTCAGTGATCGGATGGCTGGA
TTGATTGAAAATGCGGACGGCTACCTGATTGAGTCCAACCATGATATTGAAATTCTGCGTTCAGGAGCCTATCCATGGAG
CCTTAAACAAAGGATCCTGTCTGATAAGGGGCATCTGTCTAATGAAGATGGCTCTGAAACCATGATTCGCACAATTGGCA
ACCGCACCAAGAAGATTTATCTGGGGCATCTCAGTAAGGAAAACAATATTAAAGAGCTGGCTCATATGACCATGGAATCA
AATTTGACACAAGCTGATTTTGGCGTTGGCCATGACTTCAAAGTTTTGGACACTTCGCCGGATGAAGCAACTCCTCTGAC
AGATATATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-205)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.81

100

0.788

Multiple sequence alignment