Detailed information NTG0293199

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: DK182_RS00895
• Genome accession: NZ_CP029491
• Coordinates: 148293..148619 (+)
• Length: 108 a.a.
• NCBI ID: WP_019777325.1
• Uniprot ID: -
• Organism: Streptococcus sobrinus strain 10919
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 143293..153619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK182_RS00880 (DK181_00880)	-	145588..145956 (+)	369	WP_019781971.1	DUF1033 family protein	-
DK182_RS00885 (DK181_00885)	comGA/cglA	146382..147329 (+)	948	WP_019777327.1	competence type IV pilus ATPase ComGA	Machinery gene
DK182_RS00890 (DK181_00890)	comYB	147253..148296 (+)	1044	WP_275425199.1	competence type IV pilus assembly protein ComGB	Machinery gene
DK182_RS00895 (DK181_00895)	comYC	148293..148619 (+)	327	WP_019777325.1	competence type IV pilus major pilin ComGC	Machinery gene
DK182_RS00900 (DK181_00900)	comYD	148573..149007 (+)	435	WP_254051091.1	competence type IV pilus minor pilin ComGD	Machinery gene
DK182_RS00905 (DK181_00905)	comYE	148979..149272 (+)	294	WP_002959510.1	competence type IV pilus minor pilin ComGE	Machinery gene
DK182_RS00910 (DK181_00910)	comYF	149256..149693 (+)	438	WP_002959513.1	competence type IV pilus minor pilin ComGF	Machinery gene
DK182_RS00915 (DK181_00915)	comGG	149671..150132 (+)	462	WP_002959515.1	competence type IV pilus minor pilin ComGG	-
DK182_RS00925 (DK181_00925)	-	150334..150600 (+)	267	WP_002959516.1	type II toxin-antitoxin system RelE/ParE family toxin	-
DK182_RS00930 (DK181_00930)	-	150587..150862 (+)	276	WP_019777324.1	helix-turn-helix transcriptional regulator	-
DK182_RS00935 (DK181_00935)	comYH	150961..151914 (+)	954	WP_019773539.1	class I SAM-dependent methyltransferase	Machinery gene
DK182_RS00940 (DK181_00940)	-	151977..153173 (+)	1197	WP_109833408.1	acetate kinase	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12182.25 Da
• Isoelectric Point: 10.0056

>NTDB_id=293199 DK182_RS00895 WP_019777325.1 148293..148619(+) (comYC) [Streptococcus sobrinus strain 10919]
MMKKFLKRLKGKKVNAFTLIEMLVVLLIISVLLLLFVPNLAKQKDKVKDTGGSAVVKVVESQAELYELNHSDDATVSKLV
SDGDITQKQADSYNDYYKKHKESRNVPN

Nucleotide

• Length: 327 bp

>NTDB_id=293199 DK182_RS00895 WP_019777325.1 148293..148619(+) (comYC) [Streptococcus sobrinus strain 10919]
ATGATGAAAAAATTTCTCAAACGCCTAAAAGGCAAGAAGGTCAATGCCTTCACCCTGATTGAAATGCTGGTCGTGCTACT
GATTATCAGCGTTTTGCTCCTGCTCTTTGTCCCCAATTTGGCCAAGCAAAAGGATAAGGTCAAGGATACTGGCGGTTCAG
CCGTTGTCAAGGTGGTGGAAAGTCAGGCGGAACTCTATGAACTCAATCATAGCGATGATGCCACGGTATCAAAACTAGTT
TCTGATGGTGACATCACCCAAAAACAGGCGGATTCTTACAATGATTATTACAAGAAACATAAGGAAAGTCGCAACGTTCC
GAACTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (12-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus mutans UA140	75.962	96.296	0.731
comYC	Streptococcus mutans UA159	75.962	96.296	0.731
comYC	Streptococcus gordonii str. Challis substr. CH1	67.619	97.222	0.657
comGC/cglC	Streptococcus mitis SK321	67.677	91.667	0.62
comGC/cglC	Streptococcus mitis NCTC 12261	62.617	99.074	0.62
comGC/cglC	Streptococcus pneumoniae TIGR4	63.636	91.667	0.583
comGC/cglC	Streptococcus pneumoniae Rx1	63.636	91.667	0.583
comGC/cglC	Streptococcus pneumoniae D39	63.636	91.667	0.583
comGC/cglC	Streptococcus pneumoniae R6	63.636	91.667	0.583
comGC	Lactococcus lactis subsp. cremoris KW2	61.386	93.519	0.574
comYC	Streptococcus suis isolate S10	62.5	81.481	0.509
comGC	Staphylococcus aureus MW2	50.562	82.407	0.417
comGC	Staphylococcus aureus N315	50.562	82.407	0.417