Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DK181_RS10020 Genome accession   NZ_CP029490
Coordinates   2043310..2044575 (-) Length   421 a.a.
NCBI ID   WP_028798561.1    Uniprot ID   -
Organism   Streptococcus sobrinus strain SL1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2038310..2049575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK181_RS10000 (DK182_10000) - 2039234..2039788 (-) 555 WP_002963329.1 hypothetical protein -
  DK181_RS10005 (DK182_10005) tadA 2039785..2040258 (-) 474 WP_002963331.1 tRNA adenosine(34) deaminase TadA -
  DK181_RS10010 (DK182_10010) - 2040258..2041034 (-) 777 WP_019771531.1 MBL fold metallo-hydrolase -
  DK181_RS10015 (DK182_10015) - 2041161..2043020 (-) 1860 WP_028798560.1 proline--tRNA ligase -
  DK181_RS10020 (DK182_10020) eeP 2043310..2044575 (-) 1266 WP_028798561.1 RIP metalloprotease RseP Regulator
  DK181_RS10025 (DK182_10025) - 2044880..2045674 (-) 795 WP_002960768.1 phosphatidate cytidylyltransferase -
  DK181_RS10030 (DK182_10030) - 2045687..2046442 (-) 756 WP_002960766.1 isoprenyl transferase -
  DK181_RS10035 (DK182_10035) yajC 2046720..2047079 (-) 360 WP_002960764.1 preprotein translocase subunit YajC -
  DK181_RS10040 (DK182_10040) hslO 2047566..2048438 (+) 873 WP_028798562.1 Hsp33 family molecular chaperone HslO -
  DK181_RS10045 (DK182_10045) dusB 2048425..2049405 (+) 981 WP_002960762.1 tRNA dihydrouridine synthase DusB -

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 45943.85 Da        Isoelectric Point: 9.2537

>NTDB_id=293183 DK181_RS10020 WP_028798561.1 2043310..2044575(-) (eeP) [Streptococcus sobrinus strain SL1]
MLLNIIIFIIVFGIIVTVHEYGHFYFAKRSGILVREFAIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGDDKTEIK
IGTPVSLSLNEQGLVSRINLSDKQLDNDSLPMNVTAYDLEDQLQITGLVLDETKTYSVDHDATIVEEDGTEIRIAPLDVQ
YQNASVWGRMITNFAGPMNNFILGTLVLILMVFMQGGAPNPNTNAIRVADGGPAQTAGLKTGDKILSIGDKKVENWEDLT
QAVASSTKGLKKDGSISLTVKDKSKQVKKIQVKPKKSNGSYLIGVQQALKTDFWSKLVGGFNLALTAMTQLIRAVGNIIL
HFSLNKLGGPVAMYQMVGQAAHSGLVDVLFLMGMLSMNLGVVNLFPIPALDGGKILINIIEAIRRKPLKQETETYITLVG
VAIMLVLMVAVTWNDIMRAFF

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=293183 DK181_RS10020 WP_028798561.1 2043310..2044575(-) (eeP) [Streptococcus sobrinus strain SL1]
ATGCTTTTAAACATTATTATCTTCATCATCGTCTTCGGGATTATCGTGACGGTGCATGAATATGGACACTTTTATTTTGC
CAAAAGATCGGGCATCCTCGTGCGTGAATTTGCCATCGGGATGGGGCCGAAAATCTTTGCCCATATTGGCAAGGATGGTA
CGGCCTACACCATTCGGATGCTACCTCTGGGTGGTTATGTTCGAATGGCTGGTTGGGGCGATGACAAGACTGAAATCAAG
ATAGGGACCCCTGTCAGCCTAAGCCTGAATGAACAAGGCCTGGTCTCTCGAATTAATCTGTCAGACAAGCAACTGGATAA
TGACAGCCTGCCCATGAATGTGACTGCCTACGATTTAGAAGACCAGTTGCAAATCACAGGACTGGTGCTGGATGAAACCA
AGACTTACTCGGTTGACCATGATGCCACTATCGTCGAGGAGGATGGAACCGAAATCCGCATTGCTCCGTTGGATGTCCAG
TATCAAAATGCTAGTGTCTGGGGCCGGATGATTACCAACTTTGCTGGTCCCATGAATAATTTCATTCTGGGGACCCTGGT
CCTCATCCTTATGGTTTTCATGCAGGGTGGTGCCCCCAATCCTAATACCAATGCCATCCGCGTCGCTGACGGCGGCCCAG
CTCAAACCGCTGGACTTAAGACTGGCGATAAGATTTTAAGTATCGGTGATAAGAAGGTTGAGAATTGGGAGGACCTGACC
CAGGCAGTCGCTAGCTCAACCAAGGGCCTGAAAAAGGATGGTTCAATTAGCCTAACCGTCAAGGACAAATCCAAGCAGGT
CAAGAAGATTCAGGTCAAGCCCAAGAAGTCTAATGGCTCCTACCTGATTGGCGTTCAGCAGGCTCTCAAGACAGATTTTT
GGAGCAAGCTGGTCGGTGGCTTCAACCTGGCCCTGACTGCCATGACCCAACTGATTCGGGCGGTGGGCAATATCATTCTC
CACTTTAGCCTTAATAAACTGGGTGGTCCTGTGGCCATGTATCAGATGGTTGGACAGGCAGCCCACTCCGGCCTGGTGGA
TGTTCTTTTTCTGATGGGCATGCTATCCATGAATCTGGGCGTGGTCAATCTCTTTCCAATTCCGGCTCTGGATGGCGGTA
AGATCCTCATCAATATTATCGAGGCCATCCGTCGCAAGCCCCTCAAGCAAGAAACAGAAACCTATATCACCCTAGTCGGT
GTGGCCATTATGTTGGTGCTCATGGTTGCCGTCACCTGGAACGACATCATGCGGGCCTTCTTCTAA

Domains


Predicted by InterproScan.

(207-260)

(8-407)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

66.906

99.05

0.663

  eeP Streptococcus thermophilus LMD-9

66.667

99.05

0.66


Multiple sequence alignment