Detailed information NTG0293164

Bioinformatically predicted

Overview

• Name: rcrQ
• Type: Regulator
• Locus tag: DK181_RS05045
• Genome accession: NZ_CP029490
• Coordinates: 1055590..1057338 (+)
• Length: 582 a.a.
• NCBI ID: WP_028798403.1
• Uniprot ID: -
• Organism: Streptococcus sobrinus strain SL1
• Function: regulate competence (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1037611..1059991	1055590..1057338	within	0

Gene organization within MGE regions

Location: 1037611..1059991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK181_RS10925	-	1037611..1037994 (+)	384	Protein_933	hypothetical protein	-
DK181_RS04975 (DK182_04975)	-	1038335..1040071 (+)	1737	WP_002962563.1	ABC transporter ATP-binding protein	-
DK181_RS04980 (DK182_04980)	-	1040321..1042072 (+)	1752	WP_028798405.1	ABC transporter ATP-binding protein	-
DK181_RS04985 (DK182_04985)	-	1042240..1043004 (-)	765	WP_002963402.1	NUDIX domain-containing protein	-
DK181_RS04990 (DK182_04990)	pnuC	1043001..1043822 (-)	822	Protein_937	nicotinamide riboside transporter PnuC	-
DK181_RS04995 (DK182_04995)	-	1043838..1044944 (-)	1107	WP_032798528.1	AAA family ATPase	-
DK181_RS05000 (DK182_05000)	-	1045644..1046153 (-)	510	WP_002963409.1	HdeD family acid-resistance protein	-
DK181_RS05005 (DK182_05005)	gdhA	1046376..1047728 (+)	1353	WP_002963410.1	NADP-specific glutamate dehydrogenase	-
DK181_RS05010 (DK182_05010)	-	1048322..1048774 (+)	453	WP_002959432.1	LytTR family DNA-binding domain-containing protein	-
DK181_RS05015 (DK182_05015)	-	1048764..1049207 (+)	444	WP_002959430.1	hypothetical protein	-
DK181_RS05020 (DK182_05020)	-	1049207..1050052 (+)	846	WP_002959428.1	ABC transporter ATP-binding protein	-
DK181_RS05025 (DK182_05025)	-	1050033..1050821 (+)	789	WP_002959426.1	ABC transporter permease subunit	-
DK181_RS05030 (DK182_05030)	-	1051018..1053113 (-)	2096	Protein_945	surface-anchored 5'-nucleotidase	-
DK181_RS05035 (DK182_05035)	rcrR	1053335..1053763 (+)	429	WP_002959424.1	MarR family winged helix-turn-helix transcriptional regulator	Regulator
DK181_RS05040 (DK182_05040)	rcrP	1053771..1055600 (+)	1830	WP_002959422.1	ABC transporter ATP-binding protein	Regulator
DK181_RS05045 (DK182_05045)	rcrQ	1055590..1057338 (+)	1749	WP_028798403.1	ABC transporter ATP-binding protein	Regulator
DK181_RS05050 (DK182_05050)	-	1057696..1058331 (+)	636	WP_002959419.1	ABC transporter permease	-
DK181_RS05055 (DK182_05055)	-	1058321..1059235 (+)	915	WP_002959417.1	glycine betaine ABC transporter substrate-binding protein	-
DK181_RS05060 (DK182_05060)	-	1059242..1059991 (+)	750	WP_019770237.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 582 a.a.
• Molecular weight: 64464.80 Da
• Isoelectric Point: 7.6024

>NTDB_id=293164 DK181_RS05045 WP_028798403.1 1055590..1057338(+) (rcrQ) [Streptococcus sobrinus strain SL1]
MKTKKKSLLSQMSPYLKGYRALFGLAVVFSIISSTITVIGPDKLKEMTDTMTKGLAGNIDLDKIGSIAMTLALLYIGGAL
VSYAASFIVSTLIQRFSQRLRNAIADKINKVPLKYFDSHAQGDTLSRVTNDVDLMTQSFNQSLVTMVASIVLLIGSIFMM
IKTNGFLAATAIGSVFAGFLLTGLIMARSQPLFKKQQKNLADVSGYVEEIYSGHNVVTSYNARRESKEAFEKLNQDLFSS
MWKSQFFSGIMMPMMQFIGNFGYVMVCIVGARMAINGDITMGTIVAFMTYVRIFTQPISQIAQGITQLQSANAAMGRVFE
FLDEEEMEVEDVKAKQLDKVKGDVAFENVFFGYNPDKTIIHDFSAKAKPGQKIAIVGPTGAGKTTMVNLLMRFYEINKGR
ISIDGVNIHDMKRSEVHDAFSMVLQDTWLFEGTVKENLIFNQEHITDEQVLAAAKAVGVHHYIKTLPKGYDTVLDDSVTL
SVGQKQLMTIARALLKDSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HQELMTQNGFYADLYNSQFASA

Nucleotide

• Length: 1749 bp

>NTDB_id=293164 DK181_RS05045 WP_028798403.1 1055590..1057338(+) (rcrQ) [Streptococcus sobrinus strain SL1]
ATGAAGACTAAAAAGAAATCATTACTTAGCCAAATGTCTCCTTATTTGAAGGGATATCGGGCACTGTTTGGACTGGCTGT
TGTCTTTTCTATCATTTCCAGCACTATTACCGTTATCGGACCGGATAAGCTCAAGGAAATGACGGATACCATGACCAAGG
GGCTGGCTGGTAATATTGACTTAGATAAGATTGGCTCCATCGCCATGACCTTGGCTCTCCTCTATATCGGTGGGGCTCTG
GTCTCCTATGCGGCCAGCTTTATCGTCTCAACCCTGATTCAACGCTTTTCACAACGATTGCGTAATGCCATTGCTGACAA
GATTAACAAGGTTCCCCTCAAGTATTTCGATAGTCACGCCCAAGGGGACACCCTCTCAAGGGTAACCAATGACGTCGACC
TCATGACCCAGTCCTTTAACCAAAGTCTGGTGACTATGGTGGCTTCCATTGTGCTCCTAATTGGTTCAATCTTTATGATG
ATTAAGACCAATGGCTTTTTGGCCGCAACAGCTATCGGATCAGTCTTCGCTGGTTTCCTCCTGACAGGTCTGATTATGGC
TCGCAGTCAACCGCTTTTCAAAAAGCAACAAAAGAACTTGGCTGACGTCTCTGGTTATGTCGAAGAAATTTATAGCGGAC
ACAATGTTGTTACCAGCTATAATGCCCGTCGAGAAAGTAAAGAAGCCTTTGAAAAACTGAATCAAGACCTCTTCTCAAGT
ATGTGGAAGTCTCAGTTCTTCTCAGGAATCATGATGCCCATGATGCAGTTCATCGGTAACTTCGGTTATGTCATGGTCTG
TATCGTTGGGGCCCGCATGGCCATCAATGGTGACATCACCATGGGGACCATCGTCGCCTTCATGACCTATGTCCGTATTT
TTACCCAACCGATTTCGCAAATCGCTCAAGGGATTACCCAACTCCAATCAGCCAACGCTGCTATGGGGCGGGTCTTTGAA
TTCCTGGACGAAGAAGAAATGGAAGTGGAAGATGTTAAGGCTAAGCAATTGGATAAGGTCAAGGGGGATGTCGCCTTTGA
AAATGTCTTCTTTGGCTACAATCCAGACAAGACCATTATCCATGACTTCTCAGCCAAGGCTAAGCCTGGTCAAAAGATTG
CCATTGTCGGACCAACCGGTGCTGGTAAGACGACCATGGTTAACCTGCTCATGCGTTTCTATGAAATCAATAAGGGACGA
ATTTCTATCGACGGCGTTAATATCCATGATATGAAACGCTCAGAAGTACACGATGCCTTTTCTATGGTTCTCCAAGACAC
CTGGCTCTTTGAAGGAACTGTCAAGGAAAACCTGATTTTCAACCAAGAACATATTACTGATGAACAGGTTCTGGCTGCCG
CCAAGGCGGTCGGTGTCCACCACTACATCAAGACCCTGCCTAAGGGCTATGACACTGTTCTGGATGATTCGGTCACCCTA
TCGGTCGGTCAAAAGCAATTGATGACCATCGCTCGGGCCCTGCTCAAGGACTCACCGCTCCTGATTTTGGACGAAGCAAC
CTCATCTGTTGATACCCGAACCGAAGAATTGATTCAAAAGGCCATGGACAAGCTGATGGAAGGTCGGACCTCCTTCGTGA
TTGCCCACCGTCTATCAACCATCCGCAACGCTGATCTGATTCTAGTCATGAAAGATGGTAATATCATCGAACAAGGTAAC
CACCAAGAATTGATGACGCAAAATGGCTTCTATGCCGACCTCTACAATTCTCAATTCGCCTCAGCCTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (361-508)

• ABC transporter transmembrane region (ABC_membrane) (24-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrQ	Streptococcus mutans UA159	86.874	99.485	0.864