Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   EQI56_RS09555 Genome accession   NZ_CP035165
Coordinates   1886122..1886739 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM103881     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1881122..1891739
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQI56_RS09525 (EQI56_09525) yndJ 1881439..1883079 (+) 1641 WP_038827863.1 YndJ family protein -
  EQI56_RS09530 (EQI56_09530) - 1883169..1883483 (+) 315 WP_166668700.1 hypothetical protein -
  EQI56_RS09535 (EQI56_09535) pghL 1883707..1884465 (+) 759 WP_041850786.1 gamma-polyglutamate hydrolase PghL -
  EQI56_RS09540 (EQI56_09540) - 1884492..1884941 (-) 450 WP_015483284.1 YndM family protein -
  EQI56_RS09545 (EQI56_09545) fosM 1885150..1885584 (+) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  EQI56_RS21765 - 1885493..1885770 (+) 278 Protein_1819 hypothetical protein -
  EQI56_RS09555 (EQI56_09555) dinR/lexA 1886122..1886739 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  EQI56_RS09560 (EQI56_09560) yneA 1886889..1887206 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  EQI56_RS09565 (EQI56_09565) dinL 1887225..1887878 (+) 654 WP_041850785.1 recombinase family protein -
  EQI56_RS09570 (EQI56_09570) ynzC 1887942..1888175 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  EQI56_RS09575 (EQI56_09575) recP/tkt 1888344..1890347 (+) 2004 WP_003231593.1 transketolase Machinery gene
  EQI56_RS09580 (EQI56_09580) sirA 1890500..1890946 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  EQI56_RS09585 (EQI56_09585) yneF 1891032..1891250 (+) 219 WP_003221221.1 YneF family protein -
  EQI56_RS09590 (EQI56_09590) ynzD 1891324..1891497 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=293164 EQI56_RS09555 WP_003238209.1 1886122..1886739(-) (dinR/lexA) [Bacillus subtilis strain SRCM103881]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=293164 EQI56_RS09555 WP_003238209.1 1886122..1886739(-) (dinR/lexA) [Bacillus subtilis strain SRCM103881]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment