Detailed information NTG0292795

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: DKG78_RS06300
• Genome accession: NZ_CP029466
• Coordinates: 1216711..1217664 (+)
• Length: 317 a.a.
• NCBI ID: WP_007409125.1
• Uniprot ID: A7Z3B8
• Organism: Bacillus amyloliquefaciens strain HM618
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1211711..1222664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DKG78_RS06275 (DKG78_06380)	argF	1213530..1214501 (+)	972	WP_012117275.1	ornithine carbamoyltransferase	-
DKG78_RS06280 (DKG78_06385)	-	1214577..1214756 (+)	180	WP_003155070.1	YjzC family protein	-
DKG78_RS06285 (DKG78_06390)	-	1214792..1214977 (-)	186	WP_007409129.1	YjzD family protein	-
DKG78_RS06290 (DKG78_06400)	-	1215238..1215972 (+)	735	WP_059367238.1	hypothetical protein	-
DKG78_RS06295 (DKG78_06405)	-	1216055..1216621 (+)	567	WP_007409126.1	hypothetical protein	-
DKG78_RS06300 (DKG78_06410)	med	1216711..1217664 (+)	954	WP_007409125.1	BMP family ABC transporter substrate-binding protein	Regulator
DKG78_RS06305 (DKG78_06415)	comZ	1217677..1217868 (+)	192	WP_003155061.1	ComZ family protein	Regulator
DKG78_RS06310 (DKG78_06420)	-	1217897..1218115 (-)	219	WP_007409123.1	hypothetical protein	-
DKG78_RS06315 (DKG78_06425)	-	1218282..1219220 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
DKG78_RS06320 (DKG78_06430)	fabF	1219243..1220481 (+)	1239	WP_003155056.1	beta-ketoacyl-ACP synthase II	-
DKG78_RS06325 (DKG78_06435)	-	1220565..1221350 (+)	786	WP_012117278.1	DUF2268 domain-containing protein	-
DKG78_RS06330 (DKG78_06440)	-	1221524..1222510 (+)	987	WP_132106277.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.99 Da
• Isoelectric Point: 4.6686

>NTDB_id=292795 DKG78_RS06300 WP_007409125.1 1216711..1217664(+) (med) [Bacillus amyloliquefaciens strain HM618]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=292795 DKG78_RS06300 WP_007409125.1 1216711..1217664(+) (med) [Bacillus amyloliquefaciens strain HM618]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACTATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAACACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A7Z3B8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785