Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   DKG76_RS02170 Genome accession   NZ_CP029465
Coordinates   427231..428181 (+) Length   316 a.a.
NCBI ID   WP_003240192.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain KCTC 13429     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 422231..433181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKG76_RS02145 (DKG76_02145) - 422297..423712 (+) 1416 WP_080030875.1 HAMP domain-containing sensor histidine kinase -
  DKG76_RS02150 (DKG76_02150) rapC 423875..425023 (+) 1149 WP_003240186.1 response regulator aspartate phosphatase RapC Regulator
  DKG76_RS02155 (DKG76_02155) phrC 425007..425129 (+) 123 WP_003240188.1 phosphatase RapC inhibitor PhrC Regulator
  DKG76_RS02160 (DKG76_02160) - 425225..425332 (-) 108 WP_019257466.1 YjcZ family sporulation protein -
  DKG76_RS02165 (DKG76_02165) - 425474..426847 (-) 1374 WP_003240191.1 aspartate kinase -
  DKG76_RS02170 (DKG76_02170) ceuB 427231..428181 (+) 951 WP_003240192.1 petrobactin ABC transporter permease YclN Machinery gene
  DKG76_RS02175 (DKG76_02175) yclO 428174..429121 (+) 948 WP_003240194.1 petrobactin ABC transporter permease YclO -
  DKG76_RS02180 (DKG76_02180) yclP 429115..429873 (+) 759 WP_003240196.1 petrobactin ABC transporter ATP-binding protein YclP -
  DKG76_RS02185 (DKG76_02185) - 429895..430851 (+) 957 WP_003240199.1 siderophore ABC transporter substrate-binding protein -
  DKG76_RS02190 (DKG76_02190) - 430896..432314 (-) 1419 WP_003240201.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34848.21 Da        Isoelectric Point: 9.8375

>NTDB_id=292706 DKG76_RS02170 WP_003240192.1 427231..428181(+) (ceuB) [Bacillus inaquosorum strain KCTC 13429]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSNQEASTLFASRLPRLISIIIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGSIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYIYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLVTSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=292706 DKG76_RS02170 WP_003240192.1 427231..428181(+) (ceuB) [Bacillus inaquosorum strain KCTC 13429]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTGGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAACCAAGAGGCGTCAACGCTGTTTGCTAGCCGTTTGCCGCGATTGATCAGCATTATCA
TCGCTGGCTTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCCTGCTGCTGTTTACATCCGCCAGTCCTTTAATGAAAATGCT
GGTTGCATTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACGATCT
TTATTCCGCTTGTCGGGTTAATGCTCGGGAGTATTGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTTCAAGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATATTTATGCGGATAAATTCACAGTGGCCGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGGTCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTCAAGAGCAGCCTGCCGCATAC
TGCGCTATTGGGAGCGGTTTTTGTGCTGTTTTGCGATATATTGGGCAGAATCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment