Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | DKG76_RS00575 | Genome accession | NZ_CP029465 |
| Coordinates | 103155..105587 (+) | Length | 810 a.a. |
| NCBI ID | WP_003242047.1 | Uniprot ID | A0A9Q4HXC1 |
| Organism | Bacillus inaquosorum strain KCTC 13429 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98155..110587
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKG76_RS00560 (DKG76_00560) | ctsR | 101032..101496 (+) | 465 | WP_003242054.1 | transcriptional regulator CtsR | - |
| DKG76_RS00565 (DKG76_00565) | mcsA | 101510..102067 (+) | 558 | WP_032732366.1 | protein-arginine kinase activator protein McsA | - |
| DKG76_RS00570 (DKG76_00570) | - | 102067..103158 (+) | 1092 | WP_003242049.1 | protein arginine kinase | - |
| DKG76_RS00575 (DKG76_00575) | clpC | 103155..105587 (+) | 2433 | WP_003242047.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| DKG76_RS00580 (DKG76_00580) | radA | 105678..107054 (+) | 1377 | WP_003242044.1 | DNA repair protein RadA | Machinery gene |
| DKG76_RS00585 (DKG76_00585) | disA | 107058..108140 (+) | 1083 | WP_003242042.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| DKG76_RS00590 (DKG76_00590) | - | 108255..109355 (+) | 1101 | WP_003242040.1 | PIN/TRAM domain-containing protein | - |
| DKG76_RS00595 (DKG76_00595) | ispD | 109370..110068 (+) | 699 | WP_003242038.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| DKG76_RS00600 (DKG76_00600) | ispF | 110061..110537 (+) | 477 | WP_003225745.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90047.57 Da Isoelectric Point: 6.1207
>NTDB_id=292699 DKG76_RS00575 WP_003242047.1 103155..105587(+) (clpC) [Bacillus inaquosorum strain KCTC 13429]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=292699 DKG76_RS00575 WP_003242047.1 103155..105587(+) (clpC) [Bacillus inaquosorum strain KCTC 13429]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGCATTGCTGCTAAAGCTCTTCAAGCGCTTG
GACTTGGTTCAGATAAAATACAAAAAGAAGTTGAAAGTTTAATTGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCAAGAGCTAAAAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTTGGTCATTCTTATGTTGGAACAGAACA
TATTCTTCTTGGTCTGATTCGCGAAGGAGAAGGTGTTGCTGCGAGAGTCCTGAATAACCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCAAACACG
CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTCATCGGCAGAAGCAA
GGAAATCCAGCGTGTAATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGAGAACCAGGTGTAGGTA
AAACGGCGATTGCAGAAGGTTTGGCACAGCAAATTATCAACAACGAAGTTCCCGAAATCTTGCGTGATAAACGCGTAATG
ACATTAGACATGGGAACAGTGGTTGCCGGCACAAAATACCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGACGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAACTCCATACATTAATCGGAGCGGGTGGAGCAGAAGGTGCAA
TTGATGCATCTAACATTTTAAAACCTTCACTTGCTCGGGGCGAGCTACAATGTATTGGGGCGACGACTCTCGATGAGTAC
CGAAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATCCAGGTTGATCAGCCGTCTGCAGATGAAAG
TATTCAAATTTTAAAAGGCTTGCGTGACCGATATGAAGCTCACCACCGTGTATCAATTACAGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTGATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCGCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAACGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGACAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTT
TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCTTCA
CTCTCGTGTCATCGGTCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCAAGAGCAGGGTTAAAAGACC
CTAAACGCCCAATCGGCTCATTTATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCCATTTTCGGCGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATACGTAGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTTTTCAATATTCTTCTGCAAGTTCTTGAAGACGGGCGGTTGACT
GATTCTAAAGGACGTACAGTCGATTTCCGGAATACCATTTTAATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAGAATCATAAAGACATGAAAGATAAAGTGATGGGTGAGCTGA
AACGTGCGTTCAGGCCGGAGTTCATCAACCGTATTGATGAAATCATCGTCTTCCATTCACTTGAGAAAAAACACCTGACT
GAAATCGTGTCACTGATGTCTGATCAATTAACGAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACAGAAGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGATCTGGAATACGGTGCACGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG
AGGACCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTCGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGCATTGCTGCTAAAGCTCTTCAAGCGCTTG
GACTTGGTTCAGATAAAATACAAAAAGAAGTTGAAAGTTTAATTGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCAAGAGCTAAAAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTTGGTCATTCTTATGTTGGAACAGAACA
TATTCTTCTTGGTCTGATTCGCGAAGGAGAAGGTGTTGCTGCGAGAGTCCTGAATAACCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCAAACACG
CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTCATCGGCAGAAGCAA
GGAAATCCAGCGTGTAATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGAGAACCAGGTGTAGGTA
AAACGGCGATTGCAGAAGGTTTGGCACAGCAAATTATCAACAACGAAGTTCCCGAAATCTTGCGTGATAAACGCGTAATG
ACATTAGACATGGGAACAGTGGTTGCCGGCACAAAATACCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGACGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAACTCCATACATTAATCGGAGCGGGTGGAGCAGAAGGTGCAA
TTGATGCATCTAACATTTTAAAACCTTCACTTGCTCGGGGCGAGCTACAATGTATTGGGGCGACGACTCTCGATGAGTAC
CGAAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATCCAGGTTGATCAGCCGTCTGCAGATGAAAG
TATTCAAATTTTAAAAGGCTTGCGTGACCGATATGAAGCTCACCACCGTGTATCAATTACAGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTGATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCGCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAACGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGACAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTT
TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCTTCA
CTCTCGTGTCATCGGTCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCAAGAGCAGGGTTAAAAGACC
CTAAACGCCCAATCGGCTCATTTATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCCATTTTCGGCGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATACGTAGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTTTTCAATATTCTTCTGCAAGTTCTTGAAGACGGGCGGTTGACT
GATTCTAAAGGACGTACAGTCGATTTCCGGAATACCATTTTAATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAGAATCATAAAGACATGAAAGATAAAGTGATGGGTGAGCTGA
AACGTGCGTTCAGGCCGGAGTTCATCAACCGTATTGATGAAATCATCGTCTTCCATTCACTTGAGAAAAAACACCTGACT
GAAATCGTGTCACTGATGTCTGATCAATTAACGAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACAGAAGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGATCTGGAATACGGTGCACGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG
AGGACCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTCGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.259 |
100 |
0.993 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.374 |
99.012 |
0.499 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
100 |
0.474 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.359 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae Rx1 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.117 |
99.877 |
0.451 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.383 |
87.778 |
0.425 |
| clpE | Streptococcus mutans UA159 |
53.005 |
80.123 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.451 |
76.914 |
0.411 |
| clpE | Streptococcus pneumoniae Rx1 |
53.451 |
76.914 |
0.411 |
| clpE | Streptococcus pneumoniae D39 |
53.451 |
76.914 |
0.411 |
| clpE | Streptococcus pneumoniae R6 |
53.451 |
76.914 |
0.411 |