Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   DJ572_RS18860 Genome accession   NZ_CP029461
Coordinates   3637583..3637702 (+) Length   39 a.a.
NCBI ID   WP_041334633.1    Uniprot ID   A0AA96UN30
Organism   Bacillus subtilis strain QB61     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3632583..3642702
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DJ572_RS18835 (DJ572_18730) albG 3632746..3633447 (+) 702 WP_029726080.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  DJ572_RS18840 (DJ572_18735) ywhL 3633453..3634829 (-) 1377 WP_119899894.1 YncE family protein -
  DJ572_RS18845 (DJ572_18740) ywhK 3634869..3636224 (-) 1356 WP_119899896.1 YncE family protein -
  DJ572_RS21845 (DJ572_18745) - 3636221..3636451 (-) 231 WP_088327187.1 hypothetical protein -
  DJ572_RS18855 (DJ572_18750) rapF 3636454..3637599 (+) 1146 WP_015250985.1 response regulator aspartate phosphatase RapF Regulator
  DJ572_RS18860 (DJ572_18755) phrF 3637583..3637702 (+) 120 WP_041334633.1 phosphatase RapF inhibitor PhrF Regulator
  DJ572_RS18865 (DJ572_18760) - 3637955..3638434 (+) 480 WP_015714892.1 hypothetical protein -
  DJ572_RS18870 (DJ572_18765) - 3638583..3639371 (+) 789 WP_015714893.1 membrane protein -
  DJ572_RS18875 (DJ572_18770) - 3639358..3640032 (+) 675 WP_015714894.1 hypothetical protein -
  DJ572_RS18880 (DJ572_18775) - 3640042..3640839 (+) 798 WP_231573542.1 hypothetical protein -
  DJ572_RS18885 (DJ572_18780) - 3640842..3641489 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  DJ572_RS18890 (DJ572_18785) - 3641482..3642042 (+) 561 WP_119899898.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4215.16 Da        Isoelectric Point: 9.5675

>NTDB_id=292608 DJ572_RS18860 WP_041334633.1 3637583..3637702(+) (phrF) [Bacillus subtilis strain QB61]
MKLKSKLLLSCLALCTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=292608 DJ572_RS18860 WP_041334633.1 3637583..3637702(+) (phrF) [Bacillus subtilis strain QB61]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTATGCACTGTGTTCGTAGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

97.436

100

0.974
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment