Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DF184_RS09480 Genome accession   NZ_CP029398
Coordinates   1927867..1929126 (-) Length   419 a.a.
NCBI ID   WP_024384493.1    Uniprot ID   -
Organism   Streptococcus suis strain HN105     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1922867..1934126
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DF184_RS09460 (DF184_09460) dhaL 1923784..1924359 (+) 576 WP_024401679.1 dihydroxyacetone kinase subunit DhaL -
  DF184_RS09465 (DF184_09465) dhaM 1924356..1924730 (+) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  DF184_RS09470 (DF184_09470) - 1924740..1925450 (+) 711 WP_014736436.1 MIP/aquaporin family protein -
  DF184_RS09475 (DF184_09475) - 1925675..1927537 (-) 1863 WP_109371973.1 proline--tRNA ligase -
  DF184_RS09480 (DF184_09480) eeP 1927867..1929126 (-) 1260 WP_024384493.1 RIP metalloprotease RseP Regulator
  DF184_RS09485 (DF184_09485) - 1929136..1929942 (-) 807 WP_014638692.1 phosphatidate cytidylyltransferase -
  DF184_RS09490 (DF184_09490) - 1929952..1930707 (-) 756 WP_013730586.1 isoprenyl transferase -
  DF184_RS09495 (DF184_09495) yajC 1930821..1931144 (-) 324 WP_002940126.1 preprotein translocase subunit YajC -
  DF184_RS09505 (DF184_09505) - 1931405..1932697 (-) 1293 WP_044674596.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44859.18 Da        Isoelectric Point: 5.6974

>NTDB_id=292294 DF184_RS09480 WP_024384493.1 1927867..1929126(-) (eeP) [Streptococcus suis strain HN105]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNATDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=292294 DF184_RS09480 WP_024384493.1 1927867..1929126(-) (eeP) [Streptococcus suis strain HN105]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCGGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACGGGTAAGGATGGGACGC
TTTACACCATCCGTATTCTTCCTCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTTGAAGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGTCGGTTGATGACCAACTTTGCGGGGCCTATGAATAATTTTATTCTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACGCGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATCTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTGACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTACAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTAGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654

  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654


Multiple sequence alignment