Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   DIC78_RS08045 Genome accession   NZ_CP029364
Coordinates   1577896..1578846 (-) Length   316 a.a.
NCBI ID   WP_010333025.1    Uniprot ID   -
Organism   Bacillus halotolerans strain ZB201702     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1572896..1583846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DIC78_RS08025 (DIC78_08040) - 1573762..1575180 (+) 1419 WP_095714088.1 MDR family MFS transporter -
  DIC78_RS08030 (DIC78_08045) - 1575229..1576182 (-) 954 WP_127695980.1 siderophore ABC transporter substrate-binding protein -
  DIC78_RS08035 (DIC78_08050) yclP 1576204..1576962 (-) 759 WP_106021019.1 petrobactin ABC transporter ATP-binding protein YclP -
  DIC78_RS08040 (DIC78_08055) yclO 1576956..1577903 (-) 948 WP_127695982.1 petrobactin ABC transporter permease YclO -
  DIC78_RS08045 (DIC78_08060) ceuB 1577896..1578846 (-) 951 WP_010333025.1 petrobactin ABC transporter permease YclN Machinery gene
  DIC78_RS08050 (DIC78_08065) - 1579232..1580596 (+) 1365 WP_095714086.1 aspartate kinase -
  DIC78_RS08055 (DIC78_08070) - 1580749..1580859 (+) 111 WP_106021023.1 YjcZ family sporulation protein -
  DIC78_RS08060 (DIC78_08075) - 1581006..1581098 (+) 93 WP_024120214.1 YjcZ family sporulation protein -
  DIC78_RS08065 (DIC78_08080) phrC 1581203..1581325 (-) 123 WP_010333023.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  DIC78_RS08070 (DIC78_08085) rapC 1581309..1582457 (-) 1149 WP_024120212.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35011.45 Da        Isoelectric Point: 9.8262

>NTDB_id=291963 DIC78_RS08045 WP_010333025.1 1577896..1578846(-) (ceuB) [Bacillus halotolerans strain ZB201702]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLIAFVFALVGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=291963 DIC78_RS08045 WP_010333025.1 1577896..1578846(-) (ceuB) [Bacillus halotolerans strain ZB201702]
ATGAAGCTACGTTACTTATTTTTTCTACTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTTGATTTAAGCAAAGAAGAGGCGTCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGTATTCTAA
TCGCGGGCATGAGCATGAGCATCTGCGGGCTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACAACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCTTTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTTTAGTCGGCAATTTTCTGTTTATGAAAATTCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTAGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACCTGATC
CAGAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTCTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTATCCCTGATTACGTCACTTGTTATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAACATTGTATCGATCTACAGAGGAGACAACCTGAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCATATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538

Multiple sequence alignment