Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   DIC78_RS05500 Genome accession   NZ_CP029364
Coordinates   1072738..1073529 (-) Length   263 a.a.
NCBI ID   WP_106021586.1    Uniprot ID   -
Organism   Bacillus halotolerans strain ZB201702     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 1067738..1078529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DIC78_RS05455 (DIC78_05475) - 1067891..1068754 (-) 864 WP_127695648.1 alpha/beta fold hydrolase -
  DIC78_RS05460 (DIC78_05480) - 1068741..1069073 (-) 333 WP_127695650.1 SdpI family protein -
  DIC78_RS05465 (DIC78_05485) - 1069159..1069677 (-) 519 WP_024120652.1 SH3 domain-containing protein -
  DIC78_RS05470 (DIC78_05490) - 1069870..1070082 (+) 213 WP_010333455.1 helix-turn-helix transcriptional regulator -
  DIC78_RS05475 (DIC78_05495) - 1070084..1070467 (+) 384 WP_044163733.1 hypothetical protein -
  DIC78_RS05480 (DIC78_05500) - 1070502..1070771 (-) 270 WP_024120650.1 YfhJ family protein -
  DIC78_RS05485 (DIC78_05505) - 1070896..1071048 (+) 153 WP_010333452.1 small, acid-soluble spore protein K -
  DIC78_RS05490 (DIC78_05510) - 1071081..1072274 (-) 1194 WP_127695652.1 MFS transporter -
  DIC78_RS05495 (DIC78_05515) - 1072411..1072731 (-) 321 WP_106021585.1 YfhH family protein -
  DIC78_RS05500 (DIC78_05520) recX 1072738..1073529 (-) 792 WP_106021586.1 recombination regulator RecX Regulator
  DIC78_RS05505 (DIC78_05525) - 1073618..1074529 (+) 912 WP_106021587.1 TIGR01777 family oxidoreductase -
  DIC78_RS05510 (DIC78_05530) - 1074583..1074693 (+) 111 WP_010333447.1 YfhE family protein -
  DIC78_RS05515 (DIC78_05535) - 1074759..1074950 (+) 192 WP_106021588.1 YfhD family protein -
  DIC78_RS05520 (DIC78_05540) - 1074989..1075573 (-) 585 WP_106021589.1 nitroreductase family protein -
  DIC78_RS05525 (DIC78_05545) - 1075661..1076539 (-) 879 WP_106021590.1 PhzF family phenazine biosynthesis isomerase -
  DIC78_RS05530 (DIC78_05550) - 1076654..1077685 (-) 1032 WP_024120642.1 FecCD family ABC transporter permease -

Sequence


Protein


Download         Length: 263 a.a.        Molecular weight: 30818.06 Da        Isoelectric Point: 6.3785

>NTDB_id=291961 DIC78_RS05500 WP_106021586.1 1072738..1073529(-) (recX) [Bacillus halotolerans strain ZB201702]
MPFITKISAQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLEIIEIQYGDEVKKGFNRAIDFLSYRMRSMKEV
EDHLKKKDTSAPVIAEVIHKLNDYNYLNDQEFAAAYVSTHKKTNGKGPDVLFRELKAKGIDDDTIKDTLSSFSFEEQTEK
AVKHIEKLLKKDKKLSSKEIKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=291961 DIC78_RS05500 WP_106021586.1 1072738..1073529(-) (recX) [Bacillus halotolerans strain ZB201702]
ATGCCATTTATTACAAAGATTTCAGCGCAAAAAAAGAATACGGAACGCTTTAATATTTTTCTGGATGAAAAATATGCTTT
CAGTGTTGACGCAGATGTGCTCGTGAAATTTGAGCTTAAAAAGGGAAAAGAGCTTGATGACCTCGAGATCATTGAGATTC
AATACGGAGATGAAGTGAAAAAAGGCTTCAACCGTGCGATTGATTTTTTATCCTATCGAATGCGGTCAATGAAAGAGGTA
GAAGACCATTTAAAGAAAAAAGATACCTCGGCGCCCGTCATTGCGGAAGTGATTCATAAGCTGAACGATTACAACTATTT
AAATGACCAAGAGTTTGCGGCGGCCTATGTGAGCACCCACAAAAAAACAAACGGAAAAGGGCCTGACGTTTTGTTCAGAG
AGCTGAAAGCGAAGGGGATTGATGACGACACCATCAAAGATACGCTGAGTTCTTTCTCCTTTGAAGAACAGACGGAAAAA
GCAGTTAAGCATATCGAAAAGCTTCTGAAGAAAGACAAGAAACTCTCTTCAAAAGAAATCAAACAGCGAGCACAGATGCA
GCTGCAGCGCAAAGGCTTCTCATTTGATGTCATCTCTGCGGCGCTGGAGCAGATTGAATACGAAAATGATGAAGACACTG
AAAAAGAAGCGCTGCGTCTTCATGCGGAAAAAGCGTTTAGAAAATACCGTTATGACGGCTCCTATGAAAGTGCCATGAAG
GTCAAACAATTTTTATTCAGAAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains


Predicted by InterproScan.

(84-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

91.635

100

0.916


Multiple sequence alignment