Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | DIW83_RS01645 | Genome accession | NZ_CP029351 |
| Coordinates | 347166..347648 (+) | Length | 160 a.a. |
| NCBI ID | WP_004884685.1 | Uniprot ID | A0A1V0YN91 |
| Organism | Acinetobacter nosocomialis strain NCTC 8102 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 342166..352648
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DIW83_RS01640 (DIW83_01640) | - | 344184..347153 (+) | 2970 | Protein_307 | PilC/PilY family type IV pilus protein | - |
| DIW83_RS01645 (DIW83_01645) | pilY2 | 347166..347648 (+) | 483 | WP_004884685.1 | type IV pilin protein | Machinery gene |
| DIW83_RS01650 (DIW83_01650) | pilE | 347645..348070 (+) | 426 | WP_016803889.1 | type IV pilin protein | Machinery gene |
| DIW83_RS01655 (DIW83_01655) | rpsP | 348217..348468 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| DIW83_RS01660 (DIW83_01660) | rimM | 348488..349036 (+) | 549 | WP_004711694.1 | ribosome maturation factor RimM | - |
| DIW83_RS01665 (DIW83_01665) | trmD | 349083..349838 (+) | 756 | WP_002051760.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| DIW83_RS01670 (DIW83_01670) | rplS | 350054..350422 (+) | 369 | WP_002051668.1 | 50S ribosomal protein L19 | - |
| DIW83_RS01675 (DIW83_01675) | - | 350474..351415 (-) | 942 | WP_080593661.1 | lipase family alpha/beta hydrolase | - |
| DIW83_RS01680 (DIW83_01680) | - | 351530..352564 (-) | 1035 | WP_016803887.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17498.71 Da Isoelectric Point: 9.1549
>NTDB_id=291889 DIW83_RS01645 WP_004884685.1 347166..347648(+) (pilY2) [Acinetobacter nosocomialis strain NCTC 8102]
MSKYYNLKFNRGFTLIELMVTLLTLAILVAIAVPSYQSYARRATASAAKSEILKLAERLEQHKSRNFTYRGFTTTSVTLT
RGGYTIQITDDTTAGNLLTSSAANGQTWVIRATTTDSRNLNFIAKNSGLRCQSLTATAVDNDCGGTTTCNTCEANSESWQ
MSKYYNLKFNRGFTLIELMVTLLTLAILVAIAVPSYQSYARRATASAAKSEILKLAERLEQHKSRNFTYRGFTTTSVTLT
RGGYTIQITDDTTAGNLLTSSAANGQTWVIRATTTDSRNLNFIAKNSGLRCQSLTATAVDNDCGGTTTCNTCEANSESWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=291889 DIW83_RS01645 WP_004884685.1 347166..347648(+) (pilY2) [Acinetobacter nosocomialis strain NCTC 8102]
ATGAGTAAATACTATAATTTGAAGTTCAATCGGGGTTTTACTCTGATTGAACTTATGGTCACTCTTCTTACTTTAGCTAT
TCTTGTTGCTATTGCTGTTCCTTCTTATCAAAGTTATGCCCGTAGAGCTACCGCATCTGCCGCTAAGAGTGAGATTTTAA
AATTAGCTGAGCGATTGGAGCAGCATAAGTCTAGAAATTTTACCTATAGGGGATTTACCACAACCTCTGTAACGTTAACT
CGTGGGGGGTATACGATTCAGATCACTGATGATACGACTGCTGGTAATTTATTAACGAGTTCTGCTGCGAATGGGCAGAC
ATGGGTGATTAGAGCGACTACTACAGATTCCAGAAATCTTAATTTTATTGCTAAAAACTCAGGTTTACGTTGCCAGAGCT
TAACAGCTACTGCTGTTGATAATGATTGTGGTGGAACAACTACATGTAACACATGTGAAGCAAATAGTGAGAGTTGGCAG
TGA
ATGAGTAAATACTATAATTTGAAGTTCAATCGGGGTTTTACTCTGATTGAACTTATGGTCACTCTTCTTACTTTAGCTAT
TCTTGTTGCTATTGCTGTTCCTTCTTATCAAAGTTATGCCCGTAGAGCTACCGCATCTGCCGCTAAGAGTGAGATTTTAA
AATTAGCTGAGCGATTGGAGCAGCATAAGTCTAGAAATTTTACCTATAGGGGATTTACCACAACCTCTGTAACGTTAACT
CGTGGGGGGTATACGATTCAGATCACTGATGATACGACTGCTGGTAATTTATTAACGAGTTCTGCTGCGAATGGGCAGAC
ATGGGTGATTAGAGCGACTACTACAGATTCCAGAAATCTTAATTTTATTGCTAAAAACTCAGGTTTACGTTGCCAGAGCT
TAACAGCTACTGCTGTTGATAATGATTGTGGTGGAACAACTACATGTAACACATGTGAAGCAAATAGTGAGAGTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
83.75 |
100 |
0.838 |
| comE | Acinetobacter baylyi ADP1 |
37.209 |
100 |
0.4 |