Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DG474_RS04695 Genome accession   NZ_CP029257
Coordinates   951886..952695 (+) Length   269 a.a.
NCBI ID   WP_001290606.1    Uniprot ID   A0A081R5M0
Organism   Streptococcus oralis strain CCUG 53468     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 946886..957695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DG474_RS04675 (DG474_04775) pta 947543..948517 (+) 975 WP_049484120.1 phosphate acetyltransferase -
  DG474_RS04680 (DG474_04780) mutY 948600..949778 (+) 1179 WP_255778925.1 A/G-specific adenine glycosylase -
  DG474_RS04685 (DG474_04785) micA 949835..950542 (+) 708 WP_000722056.1 response regulator YycF Regulator
  DG474_RS04690 (DG474_04790) micB 950535..951884 (+) 1350 WP_000568720.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DG474_RS04695 (DG474_04795) vicX 951886..952695 (+) 810 WP_001290606.1 MBL fold metallo-hydrolase Regulator
  DG474_RS04700 (DG474_04800) - 952783..953556 (+) 774 WP_000824597.1 potassium channel family protein -
  DG474_RS04705 (DG474_04805) - 953593..953940 (-) 348 WP_070800487.1 PedC/BrcD family bacteriocin maturation disulfide isomerase -
  DG474_RS04710 (DG474_04810) - 954052..955770 (-) 1719 WP_049518753.1 phospho-sugar mutase -
  DG474_RS04715 (DG474_04815) - 956181..957335 (+) 1155 WP_000722099.1 DUF4352 domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29891.88 Da        Isoelectric Point: 6.3426

>NTDB_id=291417 DG474_RS04695 WP_001290606.1 951886..952695(+) (vicX) [Streptococcus oralis strain CCUG 53468]
MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKISSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=291417 DG474_RS04695 WP_001290606.1 951886..952695(+) (vicX) [Streptococcus oralis strain CCUG 53468]
ATGAGTGAAAAAGGCTTTAAATACAGTATTTTAGCATCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAAATCCTAGTAGATGCGGGCTTGTCTGGTAAGAAAATTTCAAGTCTGCTAGCTGAAATTAATCGCAAACCTGAAGATC
TGGATGCGATTCTGATTACGCATGAGCACTCAGACCATATCCATGGGGTCGGTGTCTTGGCTCGTAAATATGGCATGGAT
CTTTACGCCAATGAAAAGACTTGGCAGGCTATGGAAAATAGTAAGTACCTCGGCAAGGTGGACTCTTCGCAGAAGCATAT
TTTTGAAATGGGAAAAACCAAAACTTTTGGTGATATCGACATTGAGAGTTTTGGTGTCAGTCATGATGCGGCAGCACCAC
AGTTTTACCGATTTATGAAAGACGACAAGAGCTTCGTCATGCTGACCGATACAGGTTATGTAAGTGACCGTATGGCAGGA
ATTGTCGAGAATGCGGACGGCTACCTCATCGAGTCCAACCACGATGTGGAGATTTTGCGAGCAGGATCTTACGCTTGGCG
TCTCAAACAGCGAATTCTATCGGATCTCGGTCACCTTTCTAACGAAGACGGTGCTGAGGCCATGATTCGTGCAATGGGAA
ATCGAACAAAGAAAATCTATCTTGGTCACTTGTCCAAAGAGAACAATATCAAGGAGCTGGCTCATATGACTATGGTCAAC
CAGCTAGCCCAAGCGGATCTGGGAGTCGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACTGCAACACCATTGAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A081R5M0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment