Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | DEH84_RS10860 | Genome accession | NZ_CP029210 |
| Coordinates | 2408909..2410123 (+) | Length | 404 a.a. |
| NCBI ID | WP_109036869.1 | Uniprot ID | A0A2U8FS30 |
| Organism | Aquabacterium olei strain NBRC 110486 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2403909..2415123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DEH84_RS10825 (DEH84_10825) | - | 2404380..2405342 (+) | 963 | WP_109036862.1 | ribose-phosphate pyrophosphokinase | - |
| DEH84_RS10830 (DEH84_10830) | - | 2405423..2406046 (+) | 624 | WP_109036863.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| DEH84_RS10835 (DEH84_10835) | pth | 2406130..2406765 (+) | 636 | WP_109036864.1 | aminoacyl-tRNA hydrolase | - |
| DEH84_RS10840 (DEH84_10840) | - | 2406772..2407233 (+) | 462 | WP_109036865.1 | hypothetical protein | - |
| DEH84_RS10845 (DEH84_10845) | - | 2407274..2407558 (-) | 285 | WP_109036866.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| DEH84_RS10850 (DEH84_10850) | coaD | 2407583..2408035 (-) | 453 | WP_245932775.1 | pantetheine-phosphate adenylyltransferase | - |
| DEH84_RS10855 (DEH84_10855) | rsmD | 2408159..2408869 (-) | 711 | WP_109036868.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| DEH84_RS10860 (DEH84_10860) | pilA | 2408909..2410123 (+) | 1215 | WP_109036869.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| DEH84_RS10865 (DEH84_10865) | - | 2410128..2410988 (-) | 861 | WP_109036870.1 | DUF2726 domain-containing protein | - |
| DEH84_RS10870 (DEH84_10870) | ffh | 2411124..2412503 (-) | 1380 | WP_109036871.1 | signal recognition particle protein | - |
| DEH84_RS10875 (DEH84_10875) | ccsA | 2412536..2413387 (+) | 852 | WP_109036872.1 | cytochrome c biogenesis protein CcsA | - |
| DEH84_RS10880 (DEH84_10880) | - | 2413394..2413642 (+) | 249 | WP_109036873.1 | PP0621 family protein | - |
Sequence
Protein
Download Length: 404 a.a. Molecular weight: 41910.21 Da Isoelectric Point: 6.8543
>NTDB_id=291239 DEH84_RS10860 WP_109036869.1 2408909..2410123(+) (pilA) [Aquabacterium olei strain NBRC 110486]
MFSFIKKKLGWGQSAPEAPAEQPAAAPATPAAPETAPLPPAPAPAPVASPPTSPIVPAPAAAVPAAAPTPAAAPAPVAQA
PAAPAPVSVAEAAAPRAPEPERRSWLDKLRQGLKKTGSGIAQVFTGTRIDDALYEELESALLMADAGVAATEHLLHDLKR
RVKETKATEPAQVKALLIDAITELLAPLEKSLEVGHTTPTVIMVAGVNGAGKTTTIGKLTRHLADARQRVLLAAADTFRA
AAREQLGVWADRNQVDIVSQEGGDPAAVTFDAVQAGKARGCDVVIADTAGRLATQLHLMEELRKIKRVIGKAMDTAPHEV
LLVVDGNTGQNALAQVKAFDEALGLTGLIVTKLDGTAKGGVLAAIALWSRQRQAPVPVYFIGVGEKLEDLQTFSAREFAH
ALLS
MFSFIKKKLGWGQSAPEAPAEQPAAAPATPAAPETAPLPPAPAPAPVASPPTSPIVPAPAAAVPAAAPTPAAAPAPVAQA
PAAPAPVSVAEAAAPRAPEPERRSWLDKLRQGLKKTGSGIAQVFTGTRIDDALYEELESALLMADAGVAATEHLLHDLKR
RVKETKATEPAQVKALLIDAITELLAPLEKSLEVGHTTPTVIMVAGVNGAGKTTTIGKLTRHLADARQRVLLAAADTFRA
AAREQLGVWADRNQVDIVSQEGGDPAAVTFDAVQAGKARGCDVVIADTAGRLATQLHLMEELRKIKRVIGKAMDTAPHEV
LLVVDGNTGQNALAQVKAFDEALGLTGLIVTKLDGTAKGGVLAAIALWSRQRQAPVPVYFIGVGEKLEDLQTFSAREFAH
ALLS
Nucleotide
Download Length: 1215 bp
>NTDB_id=291239 DEH84_RS10860 WP_109036869.1 2408909..2410123(+) (pilA) [Aquabacterium olei strain NBRC 110486]
ATGTTCAGTTTCATCAAGAAAAAGCTGGGATGGGGCCAGTCTGCCCCGGAAGCGCCCGCAGAGCAGCCAGCCGCCGCACC
CGCGACGCCGGCGGCGCCCGAGACCGCCCCTCTGCCCCCCGCACCGGCCCCTGCCCCCGTGGCATCGCCGCCGACATCGC
CCATCGTGCCAGCCCCTGCTGCGGCCGTACCCGCCGCAGCCCCGACGCCGGCTGCCGCGCCTGCCCCGGTGGCCCAGGCT
CCCGCCGCGCCAGCCCCGGTGTCGGTCGCAGAAGCCGCTGCCCCCCGCGCCCCCGAGCCCGAGCGCCGCTCCTGGCTCGA
CAAGCTCCGTCAGGGTCTGAAGAAAACCGGTTCGGGCATCGCCCAGGTTTTCACGGGCACCCGCATTGACGACGCGTTGT
ACGAAGAGCTGGAATCCGCCCTGCTGATGGCCGATGCCGGCGTGGCCGCGACCGAACACCTGCTCCACGATCTCAAGCGC
CGTGTGAAGGAGACCAAGGCCACCGAGCCGGCCCAGGTGAAGGCGCTGCTGATCGACGCCATCACCGAGTTGCTGGCCCC
GCTGGAGAAATCACTGGAAGTGGGCCACACCACGCCCACCGTCATCATGGTGGCCGGCGTCAACGGCGCGGGCAAGACCA
CGACCATCGGCAAGCTGACCCGGCATCTGGCCGACGCGAGGCAACGCGTGCTGCTGGCTGCCGCCGACACCTTCCGCGCT
GCGGCGCGCGAGCAGCTGGGTGTGTGGGCCGACCGCAACCAGGTCGACATCGTCAGCCAGGAGGGTGGGGATCCGGCCGC
CGTGACGTTCGACGCCGTGCAGGCTGGCAAGGCCCGCGGCTGCGACGTGGTGATTGCCGACACGGCCGGACGCCTGGCCA
CGCAATTGCACCTGATGGAGGAGCTGCGCAAGATCAAGCGGGTCATCGGGAAGGCCATGGACACCGCGCCACACGAGGTG
TTGCTGGTGGTGGATGGCAACACGGGCCAGAACGCGCTGGCCCAGGTGAAGGCATTCGATGAAGCGCTGGGCCTGACCGG
GCTCATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGTGTGCTGGCCGCCATTGCGCTGTGGTCGCGTCAACGTCAGG
CGCCAGTGCCGGTGTACTTCATCGGTGTGGGCGAAAAGCTCGAAGACCTCCAGACCTTCAGCGCCCGCGAGTTCGCCCAT
GCGCTGCTGAGCTGA
ATGTTCAGTTTCATCAAGAAAAAGCTGGGATGGGGCCAGTCTGCCCCGGAAGCGCCCGCAGAGCAGCCAGCCGCCGCACC
CGCGACGCCGGCGGCGCCCGAGACCGCCCCTCTGCCCCCCGCACCGGCCCCTGCCCCCGTGGCATCGCCGCCGACATCGC
CCATCGTGCCAGCCCCTGCTGCGGCCGTACCCGCCGCAGCCCCGACGCCGGCTGCCGCGCCTGCCCCGGTGGCCCAGGCT
CCCGCCGCGCCAGCCCCGGTGTCGGTCGCAGAAGCCGCTGCCCCCCGCGCCCCCGAGCCCGAGCGCCGCTCCTGGCTCGA
CAAGCTCCGTCAGGGTCTGAAGAAAACCGGTTCGGGCATCGCCCAGGTTTTCACGGGCACCCGCATTGACGACGCGTTGT
ACGAAGAGCTGGAATCCGCCCTGCTGATGGCCGATGCCGGCGTGGCCGCGACCGAACACCTGCTCCACGATCTCAAGCGC
CGTGTGAAGGAGACCAAGGCCACCGAGCCGGCCCAGGTGAAGGCGCTGCTGATCGACGCCATCACCGAGTTGCTGGCCCC
GCTGGAGAAATCACTGGAAGTGGGCCACACCACGCCCACCGTCATCATGGTGGCCGGCGTCAACGGCGCGGGCAAGACCA
CGACCATCGGCAAGCTGACCCGGCATCTGGCCGACGCGAGGCAACGCGTGCTGCTGGCTGCCGCCGACACCTTCCGCGCT
GCGGCGCGCGAGCAGCTGGGTGTGTGGGCCGACCGCAACCAGGTCGACATCGTCAGCCAGGAGGGTGGGGATCCGGCCGC
CGTGACGTTCGACGCCGTGCAGGCTGGCAAGGCCCGCGGCTGCGACGTGGTGATTGCCGACACGGCCGGACGCCTGGCCA
CGCAATTGCACCTGATGGAGGAGCTGCGCAAGATCAAGCGGGTCATCGGGAAGGCCATGGACACCGCGCCACACGAGGTG
TTGCTGGTGGTGGATGGCAACACGGGCCAGAACGCGCTGGCCCAGGTGAAGGCATTCGATGAAGCGCTGGGCCTGACCGG
GCTCATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGTGTGCTGGCCGCCATTGCGCTGTGGTCGCGTCAACGTCAGG
CGCCAGTGCCGGTGTACTTCATCGGTGTGGGCGAAAAGCTCGAAGACCTCCAGACCTTCAGCGCCCGCGAGTTCGCCCAT
GCGCTGCTGAGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
46.462 |
100 |
0.488 |