Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DEH83_RS08130 Genome accession   NZ_CP029207
Coordinates   1600554..1601357 (+) Length   267 a.a.
NCBI ID   WP_255776559.1    Uniprot ID   -
Organism   Streptococcus constellatus strain TCV107     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1595554..1606357
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DEH83_RS08110 (DEH83_08145) - 1596533..1597846 (+) 1314 WP_006268747.1 glycosyltransferase family 4 protein -
  DEH83_RS08115 (DEH83_08150) - 1597873..1598205 (+) 333 WP_006268722.1 hypothetical protein -
  DEH83_RS08120 (DEH83_08155) micA 1598506..1599207 (+) 702 WP_003035055.1 response regulator YycF Regulator
  DEH83_RS08125 (DEH83_08160) micB 1599200..1600552 (+) 1353 WP_037596825.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DEH83_RS08130 (DEH83_08165) vicX 1600554..1601357 (+) 804 WP_255776559.1 MBL fold metallo-hydrolase Regulator
  DEH83_RS08135 (DEH83_08170) - 1601391..1601704 (+) 314 Protein_1559 DUF454 family protein -
  DEH83_RS08140 (DEH83_08175) rnc 1601840..1602538 (+) 699 WP_003068697.1 ribonuclease III -
  DEH83_RS08145 (DEH83_08180) smc 1602529..1606062 (+) 3534 WP_255776560.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29946.81 Da        Isoelectric Point: 5.8744

>NTDB_id=291213 DEH83_RS08130 WP_255776559.1 1600554..1601357(+) (vicX) [Streptococcus constellatus strain TCV107]
MNEKGFKYSILASGSTGNCFYLETPKKKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQDTWNAMETALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIETLRSGTYPWSLKQRILSDQGHLSNDDGAETMIRTLGIRTKKIYLGHLSKENNTKELAHITMFNQL
AQADLAVEHDFHIYDTSPDTATPLTDI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=291213 DEH83_RS08130 WP_255776559.1 1600554..1601357(+) (vicX) [Streptococcus constellatus strain TCV107]
ATGAACGAGAAGGGATTTAAGTACAGTATTTTAGCGTCAGGTTCTACTGGCAATTGTTTCTATTTAGAAACCCCAAAGAA
GAAGTTGCTGATTGACGCCGGCTTATCTGGAAAGAAAATTACCAGTTTGCTGAGTGAAATTGATCGTAAGCCAGAGGATT
TGGATGCTATTTTGGTGACGCATGAACATAAAGACCATATTCATGGTGTGGGTGTTTTAGCACGGAAATATCATTTAGAT
ATTTATGCTAATCAAGATACTTGGAATGCTATGGAAACAGCACTTGGAAAGATTGATGTCAGTCAGAAGCATATTTTTGA
AATGGGAAAAACGAAAACATTTGGTGATATTGATATTGAAAGTTTTGGAGTCAGTCATGATGCGGTTGCACCACAATTCT
ATCGATTGATGAAAGATGACAAAAGTTTTGTTTTGCTGACGGATACTGGTTATGTCAGCGATCGGATGGCAGGAATCATT
GAAAATGCAGATGGCTATTTGATTGAATCAAATCATGATATTGAAACCCTGCGCAGTGGTACTTATCCTTGGAGTTTAAA
GCAGCGAATTTTGTCTGATCAAGGGCATTTGTCGAATGATGATGGTGCTGAAACTATGATTCGCACTCTAGGGATACGGA
CAAAGAAAATCTATCTAGGACATCTCAGCAAGGAAAATAATACTAAAGAATTGGCTCATATTACAATGTTCAATCAATTG
GCACAGGCTGATTTGGCAGTTGAGCATGATTTTCACATTTATGATACCTCACCAGATACGGCAACTCCATTGACTGATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.648

100

0.816

Multiple sequence alignment