Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   DEH83_RS01335 Genome accession   NZ_CP029207
Coordinates   275995..277797 (-) Length   600 a.a.
NCBI ID   WP_048800444.1    Uniprot ID   A0A7G9B0H4
Organism   Streptococcus constellatus strain TCV107     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 270995..282797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DEH83_RS01320 (DEH83_01295) - 273559..274128 (-) 570 WP_080749299.1 LURP-one-related/scramblase family protein -
  DEH83_RS01325 (DEH83_01305) prsA 274266..275204 (-) 939 WP_003069861.1 peptidylprolyl isomerase PrsA -
  DEH83_RS01330 (DEH83_01310) - 275311..275994 (-) 684 WP_255776883.1 O-methyltransferase -
  DEH83_RS01335 (DEH83_01315) pepF 275995..277797 (-) 1803 WP_048800444.1 oligoendopeptidase F Regulator
  DEH83_RS01340 (DEH83_01320) coiA 277817..278779 (-) 963 WP_255776884.1 competence protein CoiA Machinery gene
  DEH83_RS01345 (DEH83_01325) celB 278868..279158 (-) 291 Protein_266 PTS cellobiose transporter subunit IIC -
  DEH83_RS01350 (DEH83_01330) - 279158..280144 (-) 987 Protein_267 6-phospho-beta-glucosidase -
  DEH83_RS01355 (DEH83_01335) - 280440..281609 (-) 1170 WP_255776886.1 MFS transporter -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69412.83 Da        Isoelectric Point: 4.6883

>NTDB_id=291154 DEH83_RS01335 WP_048800444.1 275995..277797(-) (pepF) [Streptococcus constellatus strain TCV107]
MAKQRNEIEEKYTWDLTTIFPTDEAFEMELAQVSKELKEASHLAGHLLDSADSLLKTTDIQMDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQVFAFYEPEFMAITDEQYQVFLVEKPELQIYQHFFDKLLQKKPHILSQREEELLAGA
GEIFSAAGDTFGILDNADIVFPIVHDEEGNEVQLTHGNYISLVESKNRTVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRKFSSAREAALSANFIPESVYESLVSAVNKHLPLLHRYVQLRAKILGISDLKMYDVYTPLSEIDYKFTYEAALM
KAEEVLAILGDDYLNRVKKAFSERWIDVCENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDQTRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNNLYADLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYATGFSAASALADKIVNGTQEDKEKYLHYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=291154 DEH83_RS01335 WP_048800444.1 275995..277797(-) (pepF) [Streptococcus constellatus strain TCV107]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGATTTAACGACGATTTTCCCAACGGATGAAGCGTTTGA
AATGGAATTAGCGCAAGTTTCAAAGGAATTAAAAGAAGCTAGTCATTTAGCAGGTCATCTTTTGGATTCAGCCGATAGCC
TTTTAAAAACGACAGACATCCAAATGGATTTAATGCGTCGTATTGAAAAGCTCTATTCCTATGCTCACATGAAAAATGAC
CAAGATACGCGTGTGGCAAAATATCAAGAGTATCAAGCCAAGGGCATGGCTATTTATAGCGAGTTCGGGCAGGTGTTTGC
TTTCTATGAGCCAGAATTTATGGCAATTACAGATGAACAGTATCAGGTTTTCTTAGTTGAAAAACCTGAATTGCAAATCT
ATCAGCACTTCTTTGACAAGTTATTGCAAAAGAAACCTCACATCCTTTCTCAACGCGAGGAAGAATTGTTGGCAGGTGCT
GGTGAAATTTTTAGTGCTGCTGGTGATACTTTTGGAATTTTGGACAATGCCGATATCGTCTTTCCAATTGTACATGATGA
AGAAGGCAATGAAGTACAATTGACGCATGGAAATTACATTAGCTTAGTGGAGTCAAAAAATCGTACAGTCCGTAAGGAAG
CTTATGAAGCACTTTATAGCGTTTATGAACAATATCAACATACTTATGCTAAGACACTCCAAACAAATGTTAAGGTGCAT
AATTACAATGCAAAAGTACGTAAGTTTTCTTCGGCACGCGAAGCAGCCTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGAGAGCTTGGTGTCTGCAGTCAACAAACATTTACCGCTCTTACATCGCTATGTTCAGTTGCGAGCTAAGATTTTAGGCA
TTTCAGATCTCAAGATGTATGACGTTTATACACCGCTATCAGAGATAGATTATAAATTTACCTATGAAGCAGCTTTGATG
AAAGCGGAAGAAGTTTTAGCAATTCTTGGAGATGATTATCTTAACCGAGTGAAAAAAGCCTTTTCAGAGCGTTGGATTGA
TGTTTGTGAGAATCAAGGTAAACGGTCAGGAGCTTATTCTGGCGGCTCTTACGATACTAATGCTTTTATGTTGCTGAATT
GGCAAGATACCTTAGATAATCTCTTCACCTTGGTTCATGAAACGGGTCACAGTATGCATTCTAGCTATACTCGTGAAACA
CAGCCTTATGTTTATGGTGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACTACCAACGAAAATATCCTGACGGAGAA
ATTATTGGAAGAAGTAGATGACGATCAAACTCGTTTTGCGATTCTGAATCATTTCTTGGATGGCTTCCGCGGAACTGTTT
TCCGCCAAACTCAATTTGCTGAGTTTGAGCATGCTATCCATAAGGCTGACCAAGAAGGTCAAGTCTTAACTAGTGAATTT
TTGAATAATTTATACGCAGATTTGAACGAAAAATATTATGGTTTGACGAAAGAAGATAATCCACAAATTCAATACGAATG
GGCACGGATTCCTCATTTTTACTATGACTATTATGTATTTCAATATGCGACTGGTTTCTCAGCAGCATCTGCCTTAGCCG
ATAAAATTGTCAATGGAACACAAGAAGATAAAGAGAAATATCTCCATTATCTCAAAGCAGGAAATTCTGATTATCCGCTG
AATGTCATTAAAAAAGCTGGTGTTGATATGGAAAAAGAAGACTATCTCAATGCTGCCTTTGCAGTCTTTGAACGTCGTCT
TGATGAATTTGAAGCACTTGTAGAAAAGTTGGGCTTAGCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G9B0H4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

68.96

99.333

0.685

Multiple sequence alignment