Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | DD555_RS08650 | Genome accession | NZ_CP029166 |
| Coordinates | 1688010..1688309 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain SVH7513 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1683010..1693309
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DD555_RS08625 (DD555_08625) | gcvPA | 1684222..1685568 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| DD555_RS08630 (DD555_08630) | gcvT | 1685588..1686679 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| DD555_RS08635 (DD555_08635) | - | 1686838..1687362 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| DD555_RS08640 (DD555_08640) | - | 1687352..1687498 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| DD555_RS08645 (DD555_08645) | comGF | 1687595..1688092 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DD555_RS08650 (DD555_08650) | comGE | 1688010..1688309 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| DD555_RS08655 (DD555_08655) | comGD | 1688296..1688742 (-) | 447 | WP_084927755.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DD555_RS08660 (DD555_08660) | comGC | 1688720..1689031 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DD555_RS08665 (DD555_08665) | comGB | 1689045..1690115 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DD555_RS08670 (DD555_08670) | comGA | 1690087..1691061 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DD555_RS08675 (DD555_08675) | - | 1691113..1691736 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| DD555_RS08680 (DD555_08680) | - | 1691733..1692062 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| DD555_RS08685 (DD555_08685) | - | 1692062..1693048 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| DD555_RS08690 (DD555_08690) | - | 1693045..1693248 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=290876 DD555_RS08650 WP_000844413.1 1688010..1688309(-) (comGE) [Staphylococcus aureus strain SVH7513]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=290876 DD555_RS08650 WP_000844413.1 1688010..1688309(-) (comGE) [Staphylococcus aureus strain SVH7513]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |