Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | CSC28_RS26955 | Genome accession | NZ_CP029093 |
| Coordinates | 5335219..5335776 (+) | Length | 185 a.a. |
| NCBI ID | WP_034081446.1 | Uniprot ID | E9KTN1 |
| Organism | Pseudomonas paraeruginosa strain AR441 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5330219..5340776
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC28_RS26935 (CSC28_5321) | pilR | 5331495..5332832 (+) | 1338 | WP_033999343.1 | two-component system response regulator PilR | Regulator |
| CSC28_RS26940 (CSC28_5322) | thiO | 5332878..5333972 (-) | 1095 | WP_058146146.1 | glycine oxidase ThiO | - |
| CSC28_RS26945 (CSC28_5323) | - | 5334107..5334616 (+) | 510 | WP_003150026.1 | GspH/FimT family protein | - |
| CSC28_RS26950 (CSC28_5324) | - | 5334722..5335228 (+) | 507 | WP_012077308.1 | Tfp pilus assembly protein FimT/FimU | - |
| CSC28_RS26955 (CSC28_5325) | pilV | 5335219..5335776 (+) | 558 | WP_034081446.1 | type IV pilus modification protein PilV | Machinery gene |
| CSC28_RS26960 (CSC28_5326) | pilW | 5335773..5336597 (+) | 825 | WP_034081447.1 | type 4a pilus minor pilin PilW | - |
| CSC28_RS26965 (CSC28_5327) | pilX | 5336594..5337181 (+) | 588 | WP_034081449.1 | type 4a pilus minor pilin PilX | - |
| CSC28_RS26970 (CSC28_5328) | pilY1 | 5337193..5340660 (+) | 3468 | WP_053817771.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 19985.21 Da Isoelectric Point: 8.2269
>NTDB_id=290452 CSC28_RS26955 WP_034081446.1 5335219..5335776(+) (pilV) [Pseudomonas paraeruginosa strain AR441]
MLLKLPRKPLRESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAVKDRLGCWAEQVKKELPGAADLLNSEFYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNPADSGADTSLCHYTLRVEP
MLLKLPRKPLRESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAVKDRLGCWAEQVKKELPGAADLLNSEFYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNPADSGADTSLCHYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=290452 CSC28_RS26955 WP_034081446.1 5335219..5335776(+) (pilV) [Pseudomonas paraeruginosa strain AR441]
ATGCTATTGAAACTCCCGCGCAAACCGCTGCGCGAATCCGGCTTCAGCCTGATCGAAGTGCTGGTCGCCCTGCTGCTGGT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTGGAGCGCAACAAGG
CCGCGATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCAAGCCCCAAGGCCCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCCTCCTCCTGCACGCCATTGCCCGACGCGGT
GAAGGACCGCCTGGGCTGCTGGGCGGAACAGGTGAAGAAGGAATTGCCGGGAGCCGCGGACCTGCTGAACAGCGAGTTCT
ACATCTGCCGCAGTTCGAAGCCGGGCGATTGCGACGGCAAGGGCTCGATGCTGGAGATCCGCCTCGCCTGGCGCGGCAAG
CAGGGCGCCTGCGTCAACCCCGCCGACAGCGGCGCCGACACCTCCCTCTGCCATTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAACTCCCGCGCAAACCGCTGCGCGAATCCGGCTTCAGCCTGATCGAAGTGCTGGTCGCCCTGCTGCTGGT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTGGAGCGCAACAAGG
CCGCGATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCAAGCCCCAAGGCCCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCCTCCTCCTGCACGCCATTGCCCGACGCGGT
GAAGGACCGCCTGGGCTGCTGGGCGGAACAGGTGAAGAAGGAATTGCCGGGAGCCGCGGACCTGCTGAACAGCGAGTTCT
ACATCTGCCGCAGTTCGAAGCCGGGCGATTGCGACGGCAAGGGCTCGATGCTGGAGATCCGCCTCGCCTGGCGCGGCAAG
CAGGGCGCCTGCGTCAACCCCGCCGACAGCGGCGCCGACACCTCCCTCTGCCATTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
90.27 |
100 |
0.903 |