Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   CSC31_RS28570 Genome accession   NZ_CP029089
Coordinates   6068978..6069385 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain AR444     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 6063978..6074385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSC31_RS28535 (CSC31_5785) - 6064646..6065584 (+) 939 WP_003101765.1 fatty acid desaturase -
  CSC31_RS28540 (CSC31_5786) - 6065603..6066433 (+) 831 WP_071557722.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
  CSC31_RS28545 (CSC31_5787) - 6066405..6067169 (-) 765 WP_001389365.1 IS6-like element IS6100 family transposase -
  CSC31_RS28555 (CSC31_5788) pilJ 6067232..6067894 (-) 663 Protein_5528 chemotaxis chemoreceptor PilJ -
  CSC31_RS28560 (CSC31_5789) - 6067979..6068515 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  CSC31_RS28565 (CSC31_5790) pilH 6068566..6068931 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  CSC31_RS28570 (CSC31_5791) pilG 6068978..6069385 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  CSC31_RS28575 (CSC31_5792) gshB 6069640..6070593 (+) 954 WP_003100943.1 glutathione synthase -
  CSC31_RS28580 (CSC31_5793) - 6070740..6071633 (+) 894 WP_003084580.1 TonB family protein -
  CSC31_RS28585 (CSC31_5794) - 6071682..6072251 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  CSC31_RS28590 (CSC31_5795) ruvX 6072251..6072685 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  CSC31_RS28595 (CSC31_5796) pyrR 6072797..6073309 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CSC31_RS28600 (CSC31_5797) - 6073333..6074337 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=290381 CSC31_RS28570 WP_003084583.1 6068978..6069385(-) (pilG) [Pseudomonas aeruginosa strain AR444]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=290381 CSC31_RS28570 WP_003084583.1 6068978..6069385(-) (pilG) [Pseudomonas aeruginosa strain AR444]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment