Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   CSC51_RS01935 Genome accession   NZ_CP029080
Coordinates   347229..348116 (-) Length   295 a.a.
NCBI ID   WP_108703116.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AR466     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 342229..353116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSC51_RS01900 - 342236..342324 (+) 89 Protein_331 hypothetical protein -
  CSC51_RS01905 (CSC51_0317) - 342432..342929 (-) 498 WP_001065267.1 glutathione peroxidase -
  CSC51_RS01910 - 342939..343199 (-) 261 WP_072468805.1 hypothetical protein -
  CSC51_RS01920 - 343581..343694 (-) 114 WP_072468803.1 hypothetical protein -
  CSC51_RS01925 (CSC51_0319) - 344369..346369 (-) 2001 WP_000776737.1 ABC transporter permease -
  CSC51_RS01930 (CSC51_0320) - 346366..347121 (-) 756 WP_000923765.1 ABC transporter ATP-binding protein -
  CSC51_RS01935 (CSC51_0321) braS 347229..348116 (-) 888 WP_108703116.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  CSC51_RS01940 (CSC51_0322) braR 348127..348792 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  CSC51_RS01945 (CSC51_0323) - 348818..349018 (-) 201 WP_000604722.1 hypothetical protein -
  CSC51_RS01950 (CSC51_0324) - 349216..350639 (+) 1424 Protein_340 alkaline phosphatase -
  CSC51_RS14465 - 350709..350819 (+) 111 WP_001791296.1 hypothetical protein -
  CSC51_RS01960 (CSC51_0325) - 350922..351377 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  CSC51_RS01965 (CSC51_0326) - 351617..352378 (-) 762 WP_000323450.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34025.28 Da        Isoelectric Point: 5.6141

>NTDB_id=290107 CSC51_RS01935 WP_108703116.1 347229..348116(-) (braS) [Staphylococcus aureus strain AR466]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKDDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQLIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEGDLPK
IFDKGYSGYNGQRQSNSTGIGLFIVKQISNHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=290107 CSC51_RS01935 WP_108703116.1 347229..348116(-) (braS) [Staphylococcus aureus strain AR466]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAGATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCGAATGTTGTGAATCGTGTTCGTCAAGAGGTAATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATAAACAATATTATTCGC
CCAATTATTATGAAATATTCAATACAGCTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGAATCGGTATTAGTGAGGGAGACTTACCTAAA
ATATTCGACAAAGGTTATTCGGGGTATAATGGACAACGTCAAAGTAATTCAACTGGGATTGGCTTATTTATTGTAAAGCA
AATTTCAAATCACACTAATCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

97.627

100

0.976

Multiple sequence alignment