Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | DDT10_RS05700 | Genome accession | NZ_CP029071 |
| Coordinates | 1119219..1120172 (+) | Length | 317 a.a. |
| NCBI ID | WP_015417205.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain ALB79 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1114219..1125172
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DDT10_RS05670 (DDT10_05670) | argF | 1116037..1117008 (+) | 972 | WP_039252015.1 | ornithine carbamoyltransferase | - |
| DDT10_RS05675 (DDT10_05675) | - | 1117084..1117263 (+) | 180 | WP_003155070.1 | YjzC family protein | - |
| DDT10_RS05680 (DDT10_05680) | - | 1117300..1117485 (-) | 186 | WP_003155069.1 | YjzD family protein | - |
| DDT10_RS05690 (DDT10_05690) | - | 1117746..1118480 (+) | 735 | WP_015417203.1 | hypothetical protein | - |
| DDT10_RS05695 (DDT10_05695) | - | 1118563..1119129 (+) | 567 | WP_015417204.1 | NAD(P) binding enzyme | - |
| DDT10_RS05700 (DDT10_05700) | med | 1119219..1120172 (+) | 954 | WP_015417205.1 | BMP family ABC transporter substrate-binding protein | Regulator |
| DDT10_RS05705 (DDT10_05705) | comZ | 1120185..1120376 (+) | 192 | WP_003155061.1 | ComZ family protein | Regulator |
| DDT10_RS05710 (DDT10_05710) | - | 1120405..1120623 (-) | 219 | WP_007409123.1 | hypothetical protein | - |
| DDT10_RS05715 (DDT10_05715) | - | 1120791..1121729 (+) | 939 | WP_007409122.1 | beta-ketoacyl-ACP synthase III | - |
| DDT10_RS05720 (DDT10_05720) | fabF | 1121752..1122990 (+) | 1239 | WP_015417206.1 | beta-ketoacyl-ACP synthase II | - |
| DDT10_RS05725 (DDT10_05725) | - | 1123072..1123857 (+) | 786 | WP_012117278.1 | DUF2268 domain-containing protein | - |
| DDT10_RS05730 (DDT10_05730) | - | 1124031..1125017 (+) | 987 | WP_033574515.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35328.96 Da Isoelectric Point: 4.6686
>NTDB_id=290020 DDT10_RS05700 WP_015417205.1 1119219..1120172(+) (med) [Bacillus amyloliquefaciens strain ALB79]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGSLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGSLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE
Nucleotide
Download Length: 954 bp
>NTDB_id=290020 DDT10_RS05700 WP_015417205.1 1119219..1120172(+) (med) [Bacillus amyloliquefaciens strain ALB79]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TTCGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TTCGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
78.233 |
100 |
0.782 |