Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EJF26_RS09595 Genome accession   NZ_CP034442
Coordinates   1896184..1896861 (+) Length   225 a.a.
NCBI ID   WP_000548970.1    Uniprot ID   -
Organism   Streptococcus oralis subsp. dentisani strain F0392     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1891184..1901861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJF26_RS09575 - 1892535..1893164 (-) 630 WP_000690828.1 MBL fold metallo-hydrolase -
  EJF26_RS09580 - 1893249..1894322 (-) 1074 WP_001273836.1 DUF2974 domain-containing protein -
  EJF26_RS09585 - 1894434..1895210 (-) 777 WP_025168948.1 ferredoxin reductase -
  EJF26_RS09590 - 1895295..1895864 (-) 570 WP_125844437.1 TetR/AcrR family transcriptional regulator -
  EJF26_RS09595 braR 1896184..1896861 (+) 678 WP_000548970.1 response regulator transcription factor Regulator
  EJF26_RS09600 - 1896854..1897828 (+) 975 WP_000887932.1 sensor histidine kinase -
  EJF26_RS09605 - 1898041..1898550 (+) 510 WP_004245951.1 FtsX-like permease family protein -
  EJF26_RS09610 - 1898739..1899788 (+) 1050 WP_000197797.1 DUF389 domain-containing protein -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 25878.00 Da        Isoelectric Point: 4.9898

>NTDB_id=289830 EJF26_RS09595 WP_000548970.1 1896184..1896861(+) (braR) [Streptococcus oralis subsp. dentisani strain F0392]
MHKILLVEDDQVIRQQVGKLLSEWGFEIVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGEVLSLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLAGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=289830 EJF26_RS09595 WP_000548970.1 1896184..1896861(+) (braR) [Streptococcus oralis subsp. dentisani strain F0392]
ATGCACAAAATTTTACTAGTAGAGGATGACCAAGTCATTCGGCAACAAGTTGGGAAATTGCTCTCTGAGTGGGGATTTGA
GATCGTTTTGGTAGAAGACTTTATGGAAGTGCTGAGTTTATTTGTCCAGTCGGAACCTCATTTGGTCCTCATGGATATTG
GTTTGCCACTTTTTAATGGTTATCACTGGTGTCAGGAGATTCGTAAGATTTCCAAGGTGCCCATTATGTTTCTGTCTTCG
AGAGATCAGGCTATGGATATCGTCATGGCGATCAATATGGGAGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
CCTTTTGGCTAAGGTTCAGGGCTTATTACGCCGTTCCTATGAGTTTGGGCGGGATGAAAGTTTGCTAGAGTATGCAGGTG
TGATTCTCAATACCAAGTCTATGGATCTGCACTATCAAGGTGAAGTCCTGAGCCTAACCAAGAATGAATTTCAAATTTTG
CGGGTTTTGTTTGAACATGCGGGCAATATCGTGGCGCGTGATGACCTGATGCGGGAACTCTGGAACAGCGACTTTTTTAT
CGACGACAATACCCTGTCTGTTAATGTTGCTCGTTTGCGCAAAAAGCTTGAGGAACAAGGCTTGGCAGGCTTTATCGAAA
CCAAGAAAGGGATAGGATACGGACTGAAACATGCTTGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.165

96.889

0.467
  vicR Streptococcus mutans UA159

35.319

100

0.369