Detailed information NTG0289789

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: BTJ40_RS03020
• Genome accession: NZ_CP029064
• Coordinates: 664491..665891 (-)
• Length: 466 a.a.
• NCBI ID: WP_108731707.1
• Uniprot ID: A0A2S1JNA0
• Organism: Microbulbifer sp. A4B17
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 659491..670891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTJ40_RS03005 (BTJ40_03005)	-	659940..663305 (+)	3366	WP_108731704.1	pilus assembly protein	-
BTJ40_RS03010 (BTJ40_03010)	-	663365..663820 (+)	456	WP_108731705.1	type IV pilin protein	-
BTJ40_RS03015 (BTJ40_03015)	-	663827..664390 (-)	564	WP_108731706.1	GspH/FimT family pseudopilin	-
BTJ40_RS03020 (BTJ40_03020)	pilR	664491..665891 (-)	1401	WP_108731707.1	sigma-54 dependent transcriptional regulator	Regulator
BTJ40_RS03025 (BTJ40_03025)	-	666008..667591 (-)	1584	WP_108731708.1	PAS domain-containing sensor histidine kinase	-
BTJ40_RS03030 (BTJ40_03030)	-	667684..669312 (+)	1629	WP_108731709.1	NAD+ synthase	-
BTJ40_RS03035 (BTJ40_03035)	-	669373..670323 (-)	951	WP_238152116.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 466 a.a.
• Molecular weight: 51992.36 Da
• Isoelectric Point: 6.0397

>NTDB_id=289789 BTJ40_RS03020 WP_108731707.1 664491..665891(-) (pilR) [Microbulbifer sp. A4B17]
MRPLALVVDDEPDICNLLSLTLQRMNVDCHTAATLSEAKQALHKHTYSFCLTDLRLPDGDGLQLVEYIQGTPNLELPIAV
ITAHGNMDTAIKALKLGAFDFVSKPVDLERLRNLAQLALRLDSDQVPQQSDSKKELLLGEAANIRKLRKQISKVARSDAP
IYISGESGAGKELAARSIHLQSPRAENPFIAINCGAIPSELMESEFFGHQKGSFTGAHKDHKGLLQSAEGGTLFLDEVAD
LPLEMQVKLLRAIQEKSIRPIGSNKEISIDTRILSATHKDLSEEVTGGRFRNDLYYRINVIEITVPPLRDRTEDIPLLTD
VIMQRIASSAGLTPPALSHEAMIALQNYSFPGNVRQLENILERAFTLSDQNIIREEDLLLECNNSQENSLDKKRSITLPQ
AEKTTSIENFNANKSDSLDEFLQRIEKEVIEETLVKTRWNRTAAAQKLGISFRSLRYRLKKLGLEN

Nucleotide

• Length: 1401 bp

>NTDB_id=289789 BTJ40_RS03020 WP_108731707.1 664491..665891(-) (pilR) [Microbulbifer sp. A4B17]
ATGCGCCCACTGGCACTAGTTGTCGATGATGAACCAGATATATGTAATCTGCTCAGCCTCACACTTCAAAGGATGAACGT
TGACTGCCATACAGCAGCAACACTTTCAGAAGCTAAACAGGCACTCCACAAGCATACCTATAGTTTTTGCCTGACCGATT
TACGCCTGCCTGATGGGGACGGCTTACAATTAGTCGAATACATTCAAGGGACCCCTAATTTAGAACTTCCCATAGCGGTC
ATAACGGCCCACGGGAATATGGATACAGCGATTAAAGCACTAAAACTCGGGGCATTTGACTTCGTTAGTAAACCAGTAGA
TCTCGAACGATTGCGAAATTTGGCACAGCTCGCCCTTCGCTTAGACAGCGATCAAGTACCACAACAGAGTGACTCTAAAA
AAGAGCTCCTCCTGGGAGAGGCGGCTAATATACGTAAGTTGCGTAAGCAAATAAGCAAGGTGGCCCGCAGTGATGCCCCT
ATCTACATTAGTGGTGAATCCGGAGCAGGCAAAGAGTTAGCCGCTCGCTCTATCCACTTACAAAGCCCCAGAGCTGAAAA
TCCGTTTATTGCGATAAACTGCGGTGCCATACCTTCTGAACTTATGGAGAGTGAGTTCTTTGGCCACCAAAAGGGAAGTT
TTACCGGTGCGCACAAAGATCATAAAGGCCTTCTGCAAAGCGCGGAGGGCGGTACCCTTTTTCTGGATGAAGTAGCAGAC
CTTCCTCTGGAAATGCAAGTAAAGCTTCTCAGAGCAATTCAAGAAAAATCCATACGACCAATTGGCTCCAACAAAGAAAT
ATCAATAGATACACGCATTCTAAGTGCAACCCACAAGGACTTAAGTGAAGAAGTAACAGGCGGGCGTTTCCGAAACGACC
TTTATTATCGTATAAATGTTATCGAAATTACTGTCCCTCCTCTTCGTGACAGGACCGAAGATATCCCTCTACTAACTGAT
GTCATTATGCAACGTATAGCCTCTAGCGCAGGGCTTACCCCTCCAGCCTTATCACATGAAGCTATGATTGCTTTGCAAAA
TTATTCCTTCCCAGGAAATGTCAGACAACTTGAGAACATTCTTGAAAGAGCTTTCACTTTATCTGATCAAAACATAATTC
GAGAGGAAGACCTCCTACTTGAGTGTAACAATAGTCAAGAAAACTCTTTAGATAAAAAGCGCAGCATTACCCTACCTCAG
GCAGAAAAAACCACCAGCATAGAAAACTTCAACGCAAACAAGAGCGATTCACTGGACGAATTCCTACAAAGGATAGAGAA
AGAAGTTATCGAGGAAACCTTAGTTAAAACACGATGGAATCGAACTGCTGCAGCCCAAAAGCTTGGTATCAGCTTTCGCT
CTCTTAGGTATAGGTTAAAAAAGCTTGGACTTGAGAATTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (422-462)

• Response regulator receiver domain (Response_reg) (6-114)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

3D structure

• AlphaFold DB: A0A2S1JNA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	55.794	100	0.558
pilR	Acinetobacter baumannii strain A118	49.895	100	0.509