Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BTJ40_RS01275 Genome accession   NZ_CP029064
Coordinates   259532..259927 (+) Length   131 a.a.
NCBI ID   WP_020413651.1    Uniprot ID   -
Organism   Microbulbifer sp. A4B17     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 254532..264927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTJ40_RS01250 (BTJ40_01250) hemC 255166..256083 (-) 918 WP_108731416.1 hydroxymethylbilane synthase -
  BTJ40_RS01255 (BTJ40_01255) ruvX 256161..256583 (-) 423 WP_108731417.1 Holliday junction resolvase RuvX -
  BTJ40_RS01260 (BTJ40_01260) - 256604..257188 (-) 585 WP_108731418.1 YqgE/AlgH family protein -
  BTJ40_RS01265 (BTJ40_01265) - 257223..258131 (-) 909 WP_108731419.1 energy transducer TonB -
  BTJ40_RS01270 (BTJ40_01270) gshB 258224..259180 (-) 957 WP_108731420.1 glutathione synthase -
  BTJ40_RS01275 (BTJ40_01275) pilG 259532..259927 (+) 396 WP_020413651.1 twitching motility response regulator PilG Regulator
  BTJ40_RS01280 (BTJ40_01280) pilH 260164..260526 (+) 363 WP_108731421.1 twitching motility response regulator PilH -
  BTJ40_RS01285 (BTJ40_01285) - 260543..261082 (+) 540 WP_108731422.1 chemotaxis protein CheW -
  BTJ40_RS01290 (BTJ40_01290) - 261243..263384 (+) 2142 WP_108731423.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14332.55 Da        Isoelectric Point: 7.2147

>NTDB_id=289785 BTJ40_RS01275 WP_020413651.1 259532..259927(+) (pilG) [Microbulbifer sp. A4B17]
MELNWESLTVMVIDDSKTIRRTAETLLQKAGCTVVTATDGFDALAKIADSRPDVIFVDIMMPRLDGYQTCALIKNNSEFR
STPVVMLSSKDGLFDKAKGRVVGCDQYLTKPFSKSELLGAISAHAKPHHAA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=289785 BTJ40_RS01275 WP_020413651.1 259532..259927(+) (pilG) [Microbulbifer sp. A4B17]
ATGGAGCTTAACTGGGAAAGTCTGACTGTAATGGTGATCGACGACAGTAAGACAATTCGCCGCACAGCGGAGACGTTGCT
GCAAAAGGCGGGCTGTACAGTGGTCACTGCGACAGACGGTTTTGATGCGTTAGCAAAAATCGCGGACTCCCGTCCGGATG
TCATTTTTGTCGATATTATGATGCCTCGCCTGGATGGCTATCAGACCTGTGCACTGATAAAAAATAATAGCGAGTTCCGC
TCCACTCCTGTTGTAATGCTGTCGAGTAAGGATGGATTGTTCGATAAGGCAAAAGGGCGTGTAGTTGGTTGCGATCAATA
TCTGACCAAGCCTTTTAGTAAGAGTGAGCTGTTGGGCGCTATTTCAGCCCACGCCAAACCACATCACGCTGCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

94.656

0.695
  vicR Streptococcus mutans UA159

41.026

89.313

0.366

Multiple sequence alignment