Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | DCO55_RS02585 | Genome accession | NZ_CP029053 |
| Coordinates | 489870..490520 (-) | Length | 216 a.a. |
| NCBI ID | WP_032593192.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain c021 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 479852..508655 | 489870..490520 | within | 0 |
Gene organization within MGE regions
Location: 479852..508655
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DCO55_RS02500 (DCO55_02570) | - | 479852..481054 (+) | 1203 | WP_253684208.1 | site-specific integrase | - |
| DCO55_RS02505 (DCO55_02575) | - | 481051..481221 (-) | 171 | WP_002864902.1 | AlpA family transcriptional regulator | - |
| DCO55_RS02510 (DCO55_02580) | - | 481214..481756 (-) | 543 | WP_253684210.1 | pentapeptide repeat-containing protein | - |
| DCO55_RS02515 (DCO55_02585) | - | 481744..481950 (-) | 207 | WP_032593181.1 | hypothetical protein | - |
| DCO55_RS02520 (DCO55_02590) | - | 481947..482633 (-) | 687 | WP_032593184.1 | hypothetical protein | - |
| DCO55_RS02525 (DCO55_02595) | - | 482636..483055 (-) | 420 | WP_032593187.1 | YopX family protein | - |
| DCO55_RS02530 (DCO55_02600) | - | 483088..483660 (-) | 573 | WP_050460521.1 | antA/AntB antirepressor family protein | - |
| DCO55_RS02535 (DCO55_02605) | - | 483848..484111 (-) | 264 | WP_011049695.1 | hypothetical protein | - |
| DCO55_RS02540 (DCO55_02610) | - | 484092..484787 (-) | 696 | WP_052824627.1 | hypothetical protein | - |
| DCO55_RS02545 (DCO55_02615) | - | 484787..485719 (-) | 933 | WP_253684212.1 | recombinase RecT | - |
| DCO55_RS02550 (DCO55_02620) | - | 485721..486575 (-) | 855 | WP_038402060.1 | lambda-exonuclease family protein | - |
| DCO55_RS02555 (DCO55_02625) | - | 486577..486804 (-) | 228 | WP_002874355.1 | helix-turn-helix domain-containing protein | - |
| DCO55_RS02560 (DCO55_02630) | - | 486795..487052 (-) | 258 | WP_002865124.1 | hypothetical protein | - |
| DCO55_RS02565 (DCO55_02635) | - | 487043..487312 (-) | 270 | WP_002874357.1 | hypothetical protein | - |
| DCO55_RS02570 (DCO55_02640) | - | 487872..488144 (-) | 273 | WP_002874359.1 | hypothetical protein | - |
| DCO55_RS02575 (DCO55_02645) | - | 488288..489019 (+) | 732 | WP_002861653.1 | hypothetical protein | - |
| DCO55_RS02580 (DCO55_02650) | - | 489053..489877 (-) | 825 | WP_002874362.1 | hypothetical protein | - |
| DCO55_RS02585 (DCO55_02655) | CJE0566 | 489870..490520 (-) | 651 | WP_032593192.1 | DNA/RNA non-specific endonuclease | Regulator |
| DCO55_RS02590 (DCO55_02660) | - | 490536..491033 (-) | 498 | WP_032593193.1 | hypothetical protein | - |
| DCO55_RS02595 (DCO55_02665) | - | 491026..492231 (-) | 1206 | WP_032593196.1 | AAA family ATPase | - |
| DCO55_RS02600 (DCO55_02670) | - | 492334..493068 (-) | 735 | WP_032593197.1 | S24 family peptidase | - |
| DCO55_RS08880 (DCO55_02675) | - | 493180..493398 (+) | 219 | WP_002826741.1 | hypothetical protein | - |
| DCO55_RS02605 | - | 493395..494204 (+) | 810 | WP_253684213.1 | hypothetical protein | - |
| DCO55_RS02610 (DCO55_02690) | - | 494201..495202 (+) | 1002 | WP_052795739.1 | hypothetical protein | - |
| DCO55_RS02615 (DCO55_02695) | - | 495212..495859 (+) | 648 | WP_052789491.1 | hypothetical protein | - |
| DCO55_RS02620 (DCO55_02700) | - | 495877..496257 (+) | 381 | WP_002865488.1 | hypothetical protein | - |
| DCO55_RS02625 (DCO55_02705) | - | 496257..496643 (+) | 387 | WP_002861661.1 | terminase small subunit | - |
| DCO55_RS02630 (DCO55_02710) | - | 496640..497932 (+) | 1293 | WP_052791615.1 | terminase | - |
| DCO55_RS02635 (DCO55_02715) | - | 497922..498194 (+) | 273 | WP_002875070.1 | hypothetical protein | - |
| DCO55_RS02640 (DCO55_02720) | - | 498175..499713 (+) | 1539 | WP_002875071.1 | hypothetical protein | - |
| DCO55_RS02645 (DCO55_02725) | - | 499706..499909 (+) | 204 | WP_002875072.1 | hypothetical protein | - |
| DCO55_RS02650 (DCO55_02730) | - | 499899..500546 (+) | 648 | WP_253684214.1 | hypothetical protein | - |
| DCO55_RS02655 (DCO55_02735) | - | 500557..500937 (+) | 381 | WP_002791792.1 | hypothetical protein | - |
| DCO55_RS02660 (DCO55_02740) | - | 501202..502342 (+) | 1141 | Protein_520 | hypothetical protein | - |
| DCO55_RS02665 (DCO55_02745) | - | 502414..506107 (+) | 3694 | Protein_521 | PBECR2 nuclease fold domain-containing protein | - |
| DCO55_RS02670 (DCO55_02750) | - | 506329..506796 (-) | 468 | WP_052795736.1 | hypothetical protein | - |
| DCO55_RS02675 (DCO55_02755) | - | 506883..507530 (+) | 648 | WP_100617409.1 | hypothetical protein | - |
| DCO55_RS02680 (DCO55_02760) | - | 507621..508655 (+) | 1035 | WP_253684215.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 25364.97 Da Isoelectric Point: 9.9933
>NTDB_id=289709 DCO55_RS02585 WP_032593192.1 489870..490520(-) (CJE0566) [Campylobacter jejuni strain c021]
MKKLIILSLLTTLALADYNQYKPSEDFAKHFTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG
MKKLIILSLLTTLALADYNQYKPSEDFAKHFTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG
Nucleotide
Download Length: 651 bp
>NTDB_id=289709 DCO55_RS02585 WP_032593192.1 489870..490520(-) (CJE0566) [Campylobacter jejuni strain c021]
ATGAAAAAACTTATAATCTTATCATTATTGACAACTCTAGCCTTAGCTGATTATAACCAATACAAACCAAGTGAAGATTT
TGCTAAGCATTTTACTAAGCAAAACTGCTCACAAGTTTTGGATAAGTTTTATTATCTAAATTGTTATGATTATAATCTTA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GCGATGGATAA
ATGAAAAAACTTATAATCTTATCATTATTGACAACTCTAGCCTTAGCTGATTATAACCAATACAAACCAAGTGAAGATTT
TGCTAAGCATTTTACTAAGCAAAACTGCTCACAAGTTTTGGATAAGTTTTATTATCTAAATTGTTATGATTATAATCTTA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GCGATGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
87.442 |
99.537 |
0.87 |
| CJE1441 | Campylobacter jejuni RM1221 |
86.977 |
99.537 |
0.866 |