Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   EJN89_RS00230 Genome accession   NZ_CP034441
Coordinates   47478..48101 (+) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain PMB 81-4     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 42478..53101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJN89_RS00200 - 43452..43919 (-) 468 WP_000966142.1 CcdC family protein -
  EJN89_RS00205 - 44013..44111 (-) 99 WP_001789897.1 hypothetical protein -
  EJN89_RS00210 - 44098..44340 (-) 243 WP_000246909.1 YneF family protein -
  EJN89_RS00215 recP/tkt 44618..46606 (-) 1989 WP_000481443.1 transketolase Machinery gene
  EJN89_RS00220 - 46727..46966 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  EJN89_RS00225 sosA 47102..47335 (-) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  EJN89_RS00230 dinR/lexA 47478..48101 (+) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  EJN89_RS00235 - 48481..49497 (-) 1017 WP_168989892.1 CAP domain-containing protein -
  EJN89_RS00245 guaC 49519..50495 (-) 977 Protein_43 GMP reductase -
  EJN89_RS00250 rpsN 50652..50921 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  EJN89_RS00255 rpmG 51375..51524 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=289631 EJN89_RS00230 WP_001208760.1 47478..48101(+) (dinR/lexA) [Staphylococcus aureus strain PMB 81-4]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=289631 EJN89_RS00230 WP_001208760.1 47478..48101(+) (dinR/lexA) [Staphylococcus aureus strain PMB 81-4]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTAGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657