Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   D1J63_RS16280 Genome accession   NZ_CP034353
Coordinates   3695418..3696542 (+) Length   374 a.a.
NCBI ID   WP_030404779.1    Uniprot ID   A0A6B3QRH4
Organism   Streptomyces sp. KPB2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3690418..3701542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D1J63_RS16255 (D1J63_16255) - 3690482..3691294 (+) 813 WP_125629503.1 hypothetical protein -
  D1J63_RS37560 - 3691371..3691499 (+) 129 WP_276323134.1 hypothetical protein -
  D1J63_RS36905 - 3691592..3693373 (-) 1782 WP_206436771.1 hypothetical protein -
  D1J63_RS16275 (D1J63_16275) radA/sms 3693927..3695336 (+) 1410 WP_102932190.1 DNA repair protein RadA Machinery gene
  D1J63_RS16280 (D1J63_16280) disA 3695418..3696542 (+) 1125 WP_030404779.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  D1J63_RS36730 - 3696563..3697408 (-) 846 WP_206436772.1 hypothetical protein -
  D1J63_RS16295 (D1J63_16295) - 3697567..3698493 (+) 927 WP_125629511.1 A/G-specific adenine glycosylase -
  D1J63_RS16300 (D1J63_16300) - 3698792..3699325 (+) 534 WP_003975479.1 SigE family RNA polymerase sigma factor -
  D1J63_RS16305 (D1J63_16305) - 3699313..3699990 (+) 678 WP_176154385.1 hypothetical protein -
  D1J63_RS16310 (D1J63_16310) cseB 3700116..3700820 (+) 705 WP_102930763.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40084.82 Da        Isoelectric Point: 5.0058

>NTDB_id=289088 D1J63_RS16280 WP_030404779.1 3695418..3696542(+) (disA) [Streptomyces sp. KPB2]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTSLRDGLERVLRGNTGGLIVLGSDKTVEQMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDKLSHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=289088 D1J63_RS16280 WP_030404779.1 3695418..3696542(+) (disA) [Streptomyces sp. KPB2]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCGCCCGGCACGTCCCTGCGCGACGGCCTGGAGCGGGTCCTGCGCGGCAACACGGGCGGTCTGATCGTGC
TGGGCTCCGACAAGACCGTCGAGCAGATGTGCACGGGCGGTTTCGTGTTGGACGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCGTCCGACCTGTCGAAGATCCTGCGGGCCGGGGTGCAGCTCCTTCC
GGATCCCACCATTCCGACGGAGGAGACCGGTACGCGGCACCGGACCGCCGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TCGTGTCGGTCTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGCAGCGGCGGGTGCTGGAGGATTCGGCGGCC
ATTCTGTCGCGGGCCAATCAGGCACTGGCGACCCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTCTCCGCGGTCGCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACGGACGGGCGGCTGCTCGCGCTGCAGTTGGACGAGCTGATCGCC
GGGGTGGAGCCCGAGCGCGAGCTGGTCGTGCGGGACTACGTGCCGGAGCCGACCGCCAAGCGGTCCCGTACGGTCGACGA
GGCGCTCGCCGAGCTGGACAAGCTCAGCCACGCGGAACTGCTGGAACTGTCGACCGTGGCCCGGGCCCTGGGCTACACCG
GGTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGGCTGCTGGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCCAGTGTCGACGACCTGCAGACCGTGGA
CGGCGTCGGTGAGGCGCGGGCGCGCAGCGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6B3QRH4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447