Detailed information NTG0289026

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: DBK22_RS17205
• Genome accession: NZ_CP028961
• Coordinates: 3499605..3500753 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM102752
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3494605..3505753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DBK22_RS17185 (DBK22_03454)	-	3495002..3495685 (-)	684	WP_059366584.1	ABC transporter ATP-binding protein	-
DBK22_RS17190 (DBK22_03455)	-	3495700..3497136 (-)	1437	WP_076425710.1	ABC transporter permease	-
DBK22_RS17195 (DBK22_03456)	-	3497349..3498032 (+)	684	WP_160242544.1	response regulator transcription factor	-
DBK22_RS17200 (DBK22_03457)	-	3498019..3499452 (+)	1434	WP_162992601.1	sensor histidine kinase	-
DBK22_RS17205 (DBK22_03458)	rapC	3499605..3500753 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
DBK22_RS17210 (DBK22_03459)	phrC	3500737..3500856 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
DBK22_RS17215	-	3501005..3501115 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
DBK22_RS17220 (DBK22_03461)	-	3501195..3502559 (-)	1365	WP_020955323.1	aspartate kinase	-
DBK22_RS17225 (DBK22_03462)	ceuB	3502973..3503926 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
DBK22_RS17230 (DBK22_03463)	-	3503916..3504863 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
DBK22_RS17235 (DBK22_03464)	-	3504857..3505615 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=289026 DBK22_RS17205 WP_007410270.1 3499605..3500753(+) (rapC) [Bacillus velezensis strain SRCM102752]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=289026 DBK22_RS17205 WP_007410270.1 3499605..3500753(+) (rapC) [Bacillus velezensis strain SRCM102752]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568