Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   D1J60_RS15515 Genome accession   NZ_CP034350
Coordinates   3359826..3360950 (+) Length   374 a.a.
NCBI ID   WP_007264801.1    Uniprot ID   A0ABT7H2A7
Organism   Streptomyces sp. W1SF4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3354826..3365950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D1J60_RS15500 (D1J60_15500) - 3355266..3356012 (+) 747 WP_125604164.1 hypothetical protein -
  D1J60_RS15505 (D1J60_15505) - 3356030..3357712 (-) 1683 WP_125824048.1 sigma-70 family RNA polymerase sigma factor -
  D1J60_RS15510 (D1J60_15510) radA/sms 3358099..3359526 (+) 1428 WP_125821497.1 DNA repair protein RadA Machinery gene
  D1J60_RS15515 (D1J60_15515) disA 3359826..3360950 (+) 1125 WP_007264801.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  D1J60_RS15520 (D1J60_15520) - 3361005..3361739 (-) 735 WP_306463758.1 hypothetical protein -
  D1J60_RS15525 (D1J60_15525) - 3361963..3362583 (+) 621 WP_125821498.1 phosphatase PAP2 family protein -
  D1J60_RS15530 (D1J60_15530) - 3362607..3363542 (+) 936 WP_125821499.1 A/G-specific adenine glycosylase -
  D1J60_RS15535 (D1J60_15535) - 3363766..3364326 (+) 561 WP_007264805.1 SigE family RNA polymerase sigma factor -
  D1J60_RS15540 (D1J60_15540) - 3364365..3365018 (+) 654 WP_125602891.1 hypothetical protein -
  D1J60_RS15545 (D1J60_15545) cseB 3365053..3365766 (+) 714 WP_125602886.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40319.36 Da        Isoelectric Point: 5.1222

>NTDB_id=288994 D1J60_RS15515 WP_007264801.1 3359826..3360950(+) (disA) [Streptomyces sp. W1SF4]
MAAKDGAAAPGKSGASSKHEALMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKAVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=288994 D1J60_RS15515 WP_007264801.1 3359826..3360950(+) (disA) [Streptomyces sp. W1SF4]
GTGGCAGCCAAGGACGGTGCAGCAGCACCCGGGAAGTCCGGCGCGAGCTCCAAGCACGAGGCGTTGATGCGCGCTTCGCT
GAGCGCGGTCGCGCCTGGTCAGCCCCTGCGCGACGGGCTGGAGCGGATCGTCCGCGGCAACACGGGCGGCCTGATCGTCC
TCGGCATGGACAAGGCCGTCGAGGCGATGTGTACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCTACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTGCC
CGACGCGTCGATCCCCACGGAGGAGACGGGCACCCGTCACCGCACGGCGGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAACGGCGCGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGCGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCGGGGACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTCACCGCCGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACGGAAATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTCTCCCTCCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGGGAGCTGGTGATCCGGGACTACGTTCCGGAACCGACGGCGAAGCGTTCCCGCACGGTGGAGGA
GGCGCTGCCGGCGCTGGACGCGCTGACGCATCCGGAACTGCTGGAGCTGGCGATCGTGGCGAAGGCGCTGGGGTACACGG
GCTCGCCGGAGACCCTGGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCGAAGGTGCCGAGGCTGCCCGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTGGCGGCGTCGGTGGACGACCTCCAGACGGTGGA
CGGCGTGGGCGAGGCGCGTGCGCGCAGCGTCCGCGAGGGCCTGTCCCGCCTGGCGGAGTCCTCGATCCTCGAACGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447