Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   DBK22_RS07325 Genome accession   NZ_CP028961
Coordinates   1536287..1537087 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain SRCM102752     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1531287..1542087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DBK22_RS07300 (DBK22_01475) - 1531828..1532460 (+) 633 WP_007408365.1 helix-turn-helix domain-containing protein -
  DBK22_RS19630 - 1532757..1532894 (+) 138 WP_014470646.1 hypothetical protein -
  DBK22_RS07305 (DBK22_01477) - 1532988..1534106 (+) 1119 WP_033574248.1 NADH-dependent flavin oxidoreductase -
  DBK22_RS07310 (DBK22_01478) - 1534234..1534446 (+) 213 WP_007408362.1 spore germination protein -
  DBK22_RS07315 (DBK22_01479) - 1534572..1534784 (+) 213 WP_003153181.1 spore germination protein -
  DBK22_RS07320 (DBK22_01480) alr 1534961..1536142 (+) 1182 WP_007408361.1 alanine racemase -
  DBK22_RS07325 (DBK22_01481) spo0A 1536287..1537087 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  DBK22_RS07330 (DBK22_01482) spoIVB 1537368..1538648 (-) 1281 WP_007408360.1 SpoIVB peptidase -
  DBK22_RS07335 (DBK22_01483) recN 1538812..1540542 (-) 1731 WP_007408359.1 DNA repair protein RecN Machinery gene
  DBK22_RS07340 (DBK22_01484) ahrC 1540574..1541023 (-) 450 WP_003153173.1 transcriptional regulator AhrC/ArgR -
  DBK22_RS07345 (DBK22_01485) - 1541120..1541965 (-) 846 WP_007612503.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=288980 DBK22_RS07325 WP_003153177.1 1536287..1537087(-) (spo0A) [Bacillus velezensis strain SRCM102752]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=288980 DBK22_RS07325 WP_003153177.1 1536287..1537087(-) (spo0A) [Bacillus velezensis strain SRCM102752]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCAGATGTGCTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAACAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCCC
CGTCTGCGCAAAGCAGCATTATCCGCAGCCAGCCTGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAGCCAACCAACTCGGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97

Multiple sequence alignment