Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   FORC83_RS03320 Genome accession   NZ_CP028933
Coordinates   630662..631099 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain FORC_083     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 625662..636099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC83_RS08920 (FORC83_0660) - 626155..627306 (+) 1152 WP_228568064.1 sensor histidine kinase KdpD -
  FORC83_RS08925 (FORC83_0661) - 627330..627974 (+) 645 WP_079261384.1 DUF4118 domain-containing protein -
  FORC83_RS03305 (FORC83_0662) uvrB 628076..630049 (-) 1974 WP_002860008.1 excinuclease ABC subunit UvrB -
  FORC83_RS03310 (FORC83_0663) - 630203..630433 (+) 231 WP_002852327.1 hypothetical protein -
  FORC83_RS03315 (FORC83_0664) - 630423..630665 (+) 243 WP_002854947.1 hypothetical protein -
  FORC83_RS03320 (FORC83_0665) Cj0683 630662..631099 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  FORC83_RS03325 (FORC83_0666) priA 631081..632934 (+) 1854 WP_131234722.1 primosomal protein N' -
  FORC83_RS03330 (FORC83_0667) cipA 632944..634338 (-) 1395 WP_060810109.1 DUF2972 domain-containing protein -
  FORC83_RS03335 (FORC83_0668) ispG 634484..635557 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=288675 FORC83_RS03320 WP_002852324.1 630662..631099(+) (Cj0683) [Campylobacter jejuni strain FORC_083]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=288675 FORC83_RS03320 WP_002852324.1 630662..631099(+) (Cj0683) [Campylobacter jejuni strain FORC_083]
ATGAACAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTGTCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AATGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment