Detailed information
Bioinformatically predicted
Overview
| Name | ctsF | Type | Machinery gene |
| Locus tag | CJ12664_RS07175 | Genome accession | NZ_CP028912 |
| Coordinates | 1396668..1397849 (-) | Length | 393 a.a. |
| NCBI ID | WP_002851165.1 | Uniprot ID | Q7WYI5 |
| Organism | Campylobacter jejuni strain NCTC 12664 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1391668..1402849
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJ12664_RS07145 (CJ12664_1389) | - | 1392212..1392553 (+) | 342 | WP_002851191.1 | hypothetical protein | - |
| CJ12664_RS07150 (CJ12664_1390) | flgM | 1392616..1392813 (+) | 198 | WP_002779262.1 | flagellar biosynthesis anti-sigma factor FlgM | - |
| CJ12664_RS07155 (CJ12664_1391) | - | 1392856..1393290 (+) | 435 | WP_002779263.1 | flagellar protein FlgN | - |
| CJ12664_RS07160 (CJ12664_1392) | flgK | 1393300..1395126 (+) | 1827 | WP_002851396.1 | flagellar hook-associated protein FlgK | - |
| CJ12664_RS07165 (CJ12664_1393) | - | 1395143..1395907 (+) | 765 | WP_002851318.1 | TIGR02757 family protein | - |
| CJ12664_RS07170 (CJ12664_1394) | - | 1395911..1396675 (+) | 765 | WP_002851426.1 | TSUP family transporter | - |
| CJ12664_RS07175 (CJ12664_1395) | ctsF | 1396668..1397849 (-) | 1182 | WP_002851165.1 | type II secretion system F family protein | Machinery gene |
| CJ12664_RS07180 (CJ12664_1396) | ctsE | 1397846..1399405 (-) | 1560 | WP_002864463.1 | GspE/PulE family protein | Machinery gene |
| CJ12664_RS07185 (CJ12664_1397) | ctsX | 1399395..1399982 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| CJ12664_RS07190 (CJ12664_1398) | ctsP | 1399986..1400594 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| CJ12664_RS07195 (CJ12664_1399) | ctsD | 1400587..1401999 (-) | 1413 | WP_002862130.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| CJ12664_RS07200 (CJ12664_1400) | ctsR | 1401977..1402288 (-) | 312 | WP_015016496.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 393 a.a. Molecular weight: 45764.35 Da Isoelectric Point: 9.0938
>NTDB_id=288490 CJ12664_RS07175 WP_002851165.1 1396668..1397849(-) (ctsF) [Campylobacter jejuni strain NCTC 12664]
MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRE
LYFMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDDYGIFCIFLFVIFIVMLILAYKNFHSFAFSCDF
LFLKVPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGVNFN
MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRE
LYFMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDDYGIFCIFLFVIFIVMLILAYKNFHSFAFSCDF
LFLKVPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGVNFN
Nucleotide
Download Length: 1182 bp
>NTDB_id=288490 CJ12664_RS07175 WP_002851165.1 1396668..1397849(-) (ctsF) [Campylobacter jejuni strain NCTC 12664]
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATACAGC
ACAAGCAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTTATACTCTTTTTTAAAGAGCTAGCTTTGTTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAGAGAA
TTATATTTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGTTAGCTTTGATTAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTAAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATGACTATGGAATTTTTTGCA
TATTTTTGTTTGTTATTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAGTACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTGTTTTCTATGCTTAGTGTTGCGATGAAAAGTGGAAGACTTGAAGTATTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGCGAAAATTTGATGGATAGATTTTTGATTTTTTTAGAGCCTATGATGACTTTATTTGTAGCGCTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATACAGC
ACAAGCAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTTATACTCTTTTTTAAAGAGCTAGCTTTGTTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAGAGAA
TTATATTTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGTTAGCTTTGATTAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTAAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATGACTATGGAATTTTTTGCA
TATTTTTGTTTGTTATTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAGTACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTGTTTTCTATGCTTAGTGTTGCGATGAAAAGTGGAAGACTTGAAGTATTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGCGAAAATTTGATGGATAGATTTTTGATTTTTTTAGAGCCTATGATGACTTTATTTGTAGCGCTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsF | Campylobacter jejuni subsp. jejuni 81-176 |
99.235 |
99.746 |
0.99 |