Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   CCV52592_RS03535 Genome accession   NC_009715
Coordinates   725755..726528 (+) Length   257 a.a.
NCBI ID   WP_011992128.1    Uniprot ID   A7GXR0
Organism   Campylobacter curvus 525.92     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 720755..731528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCV52592_RS03520 (CCV52592_1582) - 722374..723192 (-) 819 WP_011992125.1 HDOD domain-containing protein -
  CCV52592_RS03525 (CCV52592_1581) ilvC 723337..724359 (+) 1023 WP_011992126.1 ketol-acid reductoisomerase -
  CCV52592_RS03530 (CCV52592_1580) - 724364..725758 (+) 1395 WP_011992127.1 divergent polysaccharide deacetylase family protein -
  CCV52592_RS03535 (CCV52592_1579) dprA 725755..726528 (+) 774 WP_011992128.1 DNA-processing protein DprA Machinery gene
  CCV52592_RS03540 (CCV52592_1578) ruvX 726525..726908 (+) 384 WP_011992129.1 Holliday junction resolvase RuvX -
  CCV52592_RS03545 (CCV52592_1577) - 726951..727778 (-) 828 WP_011992130.1 hypothetical protein -
  CCV52592_RS03550 (CCV52592_1576) queA 727775..728806 (-) 1032 WP_011992131.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  CCV52592_RS03555 (CCV52592_1575) tatC 728793..729536 (-) 744 WP_011992132.1 twin-arginine translocase subunit TatC -
  CCV52592_RS03560 (CCV52592_1574) tatB 729536..729964 (-) 429 WP_009649969.1 Sec-independent protein translocase protein TatB -
  CCV52592_RS03565 (CCV52592_1573) hemW 730030..731076 (-) 1047 WP_011992133.1 radical SAM family heme chaperone HemW -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 27668.06 Da        Isoelectric Point: 5.1971

>NTDB_id=28808 CCV52592_RS03535 WP_011992128.1 725755..726528(+) (dprA) [Campylobacter curvus 525.92]
MKFLAIDELPACLVRLENTPKGLYAIGDVSLLNLPKVAVVGSRKASVYTKECVRDLCTRLKNAGVCVVSGGAIGVDIAAH
KAAMPLTIGIFASGLDIIYPPSNAKFIKEIYENSLALSEYENGEPPLAYRFLERNRIVVALCEALVVAQADVKSGSMQSA
RLAGELGVPVFVLPQRINESGGTNKLLSEGKATLISDYDEFAAKFGDVKFAPSSDEILEFCKNGASLDDALSKFGDKIYE
YELLGKLEISNLRVKAL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=28808 CCV52592_RS03535 WP_011992128.1 725755..726528(+) (dprA) [Campylobacter curvus 525.92]
ATGAAATTTTTAGCTATAGACGAGCTGCCCGCTTGCTTGGTGCGTCTTGAAAATACGCCAAAAGGACTCTACGCGATCGG
CGATGTCTCGCTTTTAAATTTACCAAAGGTCGCAGTCGTGGGCTCTAGAAAGGCGAGCGTCTATACCAAAGAGTGCGTGA
GAGATCTTTGCACTAGGCTGAAAAATGCCGGTGTTTGCGTCGTGAGCGGTGGAGCTATCGGAGTGGATATCGCTGCACAT
AAGGCTGCGATGCCCCTTACTATCGGCATCTTTGCAAGCGGACTTGATATCATCTATCCGCCCTCAAATGCAAAATTTAT
AAAAGAAATCTACGAAAATTCCTTGGCCCTTAGCGAATACGAAAACGGCGAGCCGCCGCTTGCTTATAGATTTTTAGAGC
GAAACCGCATAGTAGTGGCGCTTTGCGAGGCGCTAGTCGTAGCTCAGGCCGACGTTAAAAGCGGCTCGATGCAAAGTGCG
AGACTGGCCGGAGAGCTTGGCGTACCGGTGTTCGTCCTGCCTCAGCGCATAAACGAAAGCGGTGGTACGAATAAGCTTCT
AAGCGAAGGCAAAGCCACGCTGATAAGCGACTACGACGAGTTTGCGGCGAAATTTGGCGATGTAAAATTCGCACCTTCAA
GCGATGAAATTTTAGAATTTTGCAAAAACGGAGCGAGCTTGGACGATGCTTTATCGAAATTTGGCGATAAAATCTACGAA
TACGAGCTTCTTGGCAAGCTTGAAATATCGAATTTAAGAGTAAAAGCCCTATGA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(7-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7GXR0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

59.74

89.883

0.537
  dprA Helicobacter pylori 26695

45.312

99.611

0.451

Multiple sequence alignment