Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   BCER98_RS04985 Genome accession   NC_009674
Coordinates   1024382..1025056 (+) Length   224 a.a.
NCBI ID   WP_011983993.1    Uniprot ID   A7GM82
Organism   Bacillus cytotoxicus NVH 391-98     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1019382..1030056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCER98_RS04965 (Bcer98_0902) - 1020343..1021980 (+) 1638 WP_011983990.1 peptide ABC transporter substrate-binding protein -
  BCER98_RS04970 (Bcer98_0903) - 1022033..1022236 (-) 204 WP_011983991.1 hypothetical protein -
  BCER98_RS04975 (Bcer98_0904) spx 1022822..1023217 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  BCER98_RS04980 (Bcer98_0905) - 1023300..1023974 (-) 675 WP_011983992.1 TerC family protein -
  BCER98_RS04985 (Bcer98_0906) mecA 1024382..1025056 (+) 675 WP_011983993.1 adaptor protein MecA Regulator
  BCER98_RS04990 (Bcer98_0907) cls 1025156..1026700 (+) 1545 WP_011983994.1 cardiolipin synthase -
  BCER98_RS04995 (Bcer98_0908) - 1026792..1027994 (+) 1203 WP_109090165.1 competence protein CoiA -
  BCER98_RS05000 (Bcer98_0909) pepF 1028087..1029913 (+) 1827 WP_011983996.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26744.89 Da        Isoelectric Point: 4.0439

>NTDB_id=28638 BCER98_RS04985 WP_011983993.1 1024382..1025056(+) (mecA) [Bacillus cytotoxicus NVH 391-98]
MDIERINDHTMKFFITYVDIEDRGFNREEIWYNRERSEQLFWEMMDEARDYDDFFIDGPLWIQVQALDKGIEVLVTKAQL
SKDGQKLELPIGLDKIIDIPLDESIESLFQQELEEEGTVTNFNEDGTLGFLIKFEDFEDVISLSHRLIFEDIKDQLYSFE
NRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKEIMSEHALETIRKHFPSKT

Nucleotide


Download         Length: 675 bp        

>NTDB_id=28638 BCER98_RS04985 WP_011983993.1 1024382..1025056(+) (mecA) [Bacillus cytotoxicus NVH 391-98]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTCATTACGTACGTTGATATAGAGGATAGAGGATTTAATCG
CGAAGAAATTTGGTATAATCGCGAGCGAAGTGAACAATTATTTTGGGAAATGATGGATGAAGCACGTGATTACGATGACT
TCTTTATTGATGGACCATTGTGGATTCAAGTACAAGCGTTAGACAAAGGGATTGAAGTGCTTGTAACGAAAGCACAGCTT
TCAAAAGATGGACAAAAATTAGAATTACCGATAGGTCTCGATAAAATTATTGATATTCCTCTAGATGAAAGCATTGAATC
GTTATTTCAACAAGAATTAGAGGAAGAAGGAACGGTTACGAATTTTAATGAAGATGGAACACTTGGATTTTTAATTAAGT
TTGAAGATTTTGAAGATGTTATTTCATTAAGTCATCGCCTAATTTTTGAAGATATAAAAGACCAACTATATTCATTTGAA
AATCGTTATTATGTATATGTTGAATTCGATGAAGTGCTACACGATGAGGAAGAAATTGACCGTATTTTAAGTATTATTTT
AGAATATGGAGAGGAATCTACTTTAACGATTCACCGTGTGAGTGAGTATGGGAAAGAGATTATGAGCGAACATGCACTTG
AGACAATTCGTAAGCATTTTCCTTCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A7GM82

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

59.91

99.107

0.594


Multiple sequence alignment