Detailed information NTG0285869

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EHF40_RS09745
• Genome accession: NZ_CP033907
• Coordinates: 1888099..1889205 (+)
• Length: 368 a.a.
• NCBI ID: WP_011529146.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain Duke-Large
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1883099..1894205

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHF40_RS09720 (EHF40_09720)	pgsA	1883208..1883750 (-)	543	WP_011185104.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EHF40_RS09725 (EHF40_09725)	-	1883764..1884789 (-)	1026	WP_011529142.1	RodZ family helix-turn-helix domain-containing protein	-
EHF40_RS09730 (EHF40_09730)	-	1884839..1886128 (-)	1290	WP_011529143.1	pitrilysin family protein	-
EHF40_RS09735 (EHF40_09735)	-	1886130..1887374 (-)	1245	WP_011529144.1	pitrilysin family protein	-
EHF40_RS09740 (EHF40_09740)	yaaA	1887684..1888097 (+)	414	WP_021299130.1	S4 domain-containing protein YaaA	-
EHF40_RS09745 (EHF40_09745)	recF	1888099..1889205 (+)	1107	WP_011529146.1	DNA replication/repair protein RecF	Machinery gene
EHF40_RS09750 (EHF40_09750)	-	1889261..1890124 (-)	864	WP_060388547.1	GRP family sugar transporter	-
EHF40_RS09755 (EHF40_09755)	guaB	1890327..1891808 (-)	1482	WP_011529148.1	IMP dehydrogenase	-
EHF40_RS09760 (EHF40_09760)	trpS	1892116..1893138 (-)	1023	WP_011529149.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41844.78 Da
• Isoelectric Point: 7.8294

>NTDB_id=285869 EHF40_RS09745 WP_011529146.1 1888099..1889205(+) (recF) [Streptococcus pyogenes strain Duke-Large]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLFELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTSIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQVDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=285869 EHF40_RS09745 WP_011529146.1 1888099..1889205(+) (recF) [Streptococcus pyogenes strain Duke-Large]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTCGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATTTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAGTATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCGTTCAAGTTGATTCTGACATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.568	99.457	0.622
recF	Bacillus subtilis subsp. subtilis str. 168	45.013	100	0.454