Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   EHF40_RS07750 Genome accession   NZ_CP033907
Coordinates   1480464..1481498 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain Duke-Large     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1475464..1486498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHF40_RS07715 (EHF40_07715) - 1476240..1476542 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  EHF40_RS07720 (EHF40_07720) - 1476535..1476831 (-) 297 WP_002983486.1 YlxR family protein -
  EHF40_RS07725 (EHF40_07725) nusA 1476847..1478004 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  EHF40_RS07730 (EHF40_07730) rimP 1478179..1478715 (-) 537 WP_011528897.1 ribosome maturation factor RimP -
  EHF40_RS07740 (EHF40_07740) trmB 1478974..1479609 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EHF40_RS07745 (EHF40_07745) - 1479609..1480400 (-) 792 WP_002983385.1 phosphotransferase family protein -
  EHF40_RS07750 (EHF40_07750) pptB 1480464..1481498 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  EHF40_RS07755 (EHF40_07755) pptA 1481501..1482226 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  EHF40_RS07760 (EHF40_07760) - 1482298..1482717 (+) 420 WP_002983376.1 HIT family protein -
  EHF40_RS07765 (EHF40_07765) - 1482714..1483070 (+) 357 WP_002983373.1 hypothetical protein -
  EHF40_RS07770 (EHF40_07770) - 1483181..1484464 (-) 1284 WP_002983372.1 LCP family protein -
  EHF40_RS07775 (EHF40_07775) - 1484473..1484997 (-) 525 WP_002994338.1 N-acetyltransferase -
  EHF40_RS07780 (EHF40_07780) tsaE 1484972..1485433 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=285847 EHF40_RS07750 WP_010922583.1 1480464..1481498(-) (pptB) [Streptococcus pyogenes strain Duke-Large]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=285847 EHF40_RS07750 WP_010922583.1 1480464..1481498(-) (pptB) [Streptococcus pyogenes strain Duke-Large]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427

Multiple sequence alignment