Detailed information NTG0285584

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: DBQ26_RS10535
• Genome accession: NZ_CP028574
• Coordinates: 1911870..1912625 (-)
• Length: 251 a.a.
• NCBI ID: WP_017482271.1
• Uniprot ID: A0A9X3QRW6
• Organism: Acinetobacter pittii strain WCHAP005046
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1906870..1917625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DBQ26_RS10505 (DBQ26_10505)	-	1907178..1907618 (-)	441	WP_017482269.1	SRPBCC family protein	-
DBQ26_RS10510 (DBQ26_10510)	tadA	1907689..1908192 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
DBQ26_RS10515 (DBQ26_10515)	hibch	1908198..1909322 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
DBQ26_RS10520 (DBQ26_10520)	ung	1909319..1910032 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
DBQ26_RS10525 (DBQ26_10525)	-	1910086..1910682 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
DBQ26_RS10530 (DBQ26_10530)	gspK	1910910..1911869 (-)	960	WP_017482270.1	type II secretion system minor pseudopilin GspK	-
DBQ26_RS10535 (DBQ26_10535)	xcpW	1911870..1912625 (-)	756	WP_017482271.1	type II secretion system minor pseudopilin GspJ	Machinery gene
DBQ26_RS10540 (DBQ26_10540)	xcpV	1912625..1913005 (-)	381	WP_017482272.1	type II secretion system minor pseudopilin GspI	Machinery gene
DBQ26_RS10545 (DBQ26_10545)	-	1912995..1913549 (-)	555	WP_017482273.1	type II secretion system protein	-
DBQ26_RS10550 (DBQ26_10550)	-	1913556..1914164 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
DBQ26_RS10555 (DBQ26_10555)	ycfH	1914201..1914974 (-)	774	WP_017482274.1	TatD family hydrolase	-
DBQ26_RS10560 (DBQ26_10560)	pilZ	1914992..1915333 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
DBQ26_RS10565 (DBQ26_10565)	holB	1915344..1916324 (-)	981	WP_017482275.1	DNA polymerase III subunit delta'	-
DBQ26_RS10570 (DBQ26_10570)	kdsB	1916338..1917099 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28666.92 Da
• Isoelectric Point: 9.7425

>NTDB_id=285584 DBQ26_RS10535 WP_017482271.1 1911870..1912625(-) (xcpW) [Acinetobacter pittii strain WCHAP005046]
MIKNKSFHSPGPASRLAARSEQMMRGYSEQSSSSCAQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLLLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=285584 DBQ26_RS10535 WP_017482271.1 1911870..1912625(-) (xcpW) [Acinetobacter pittii strain WCHAP005046]
ATGATAAAGAATAAAAGTTTTCACTCTCCAGGCCCAGCTTCCCGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCAG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGACTTATTGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80	99.602	0.797