Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | CDG55_RS08110 | Genome accession | NZ_CP028561 |
| Coordinates | 1392051..1392437 (+) | Length | 128 a.a. |
| NCBI ID | WP_087535844.1 | Uniprot ID | A0A2R4TJY3 |
| Organism | Acinetobacter sp. WCHA45 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1387051..1397437
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG55_RS08080 (CDG55_08075) | kdsB | 1387630..1388391 (+) | 762 | WP_087535848.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| CDG55_RS08085 (CDG55_08080) | - | 1388394..1389377 (+) | 984 | WP_087535847.1 | DNA polymerase III subunit delta' | - |
| CDG55_RS08090 (CDG55_08085) | - | 1389717..1390061 (+) | 345 | WP_005159897.1 | PilZ domain-containing protein | - |
| CDG55_RS08095 (CDG55_08090) | - | 1390079..1390852 (+) | 774 | WP_087535846.1 | TatD family hydrolase | - |
| CDG55_RS08100 (CDG55_08095) | - | 1390893..1391504 (+) | 612 | WP_034601445.1 | TetR/AcrR family transcriptional regulator | - |
| CDG55_RS08105 (CDG55_08100) | - | 1391513..1392064 (+) | 552 | WP_087535845.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CDG55_RS08110 (CDG55_08105) | xcpV | 1392051..1392437 (+) | 387 | WP_087535844.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| CDG55_RS08115 (CDG55_08110) | xcpW | 1392437..1393066 (+) | 630 | WP_042862502.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| CDG55_RS08120 (CDG55_08115) | gspK | 1393063..1394019 (+) | 957 | WP_087535843.1 | type II secretion system minor pseudopilin GspK | - |
| CDG55_RS08125 (CDG55_08120) | - | 1394130..1394726 (+) | 597 | WP_087535842.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| CDG55_RS08130 (CDG55_08125) | ung | 1394772..1395485 (+) | 714 | WP_050040245.1 | uracil-DNA glycosylase | - |
| CDG55_RS08135 (CDG55_08130) | - | 1395482..1396606 (+) | 1125 | WP_171287548.1 | enoyl-CoA hydratase/isomerase family protein | - |
| CDG55_RS08140 (CDG55_08135) | tadA | 1396612..1397136 (+) | 525 | WP_005159927.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 128 a.a. Molecular weight: 14295.74 Da Isoelectric Point: 10.1336
>NTDB_id=285515 CDG55_RS08110 WP_087535844.1 1392051..1392437(+) (xcpV) [Acinetobacter sp. WCHA45]
MKKIKAFTLLEVMVALAIFAVAAIALTKIAMQYTQSTSSAILRTKAQFVAMNEIAMMEMNQEWLDGTQSKQVTSQGETWQ
IDKKAQATISPKIQRIELQVSLFNTEQGKVEAGITNMVFFNYPAKART
MKKIKAFTLLEVMVALAIFAVAAIALTKIAMQYTQSTSSAILRTKAQFVAMNEIAMMEMNQEWLDGTQSKQVTSQGETWQ
IDKKAQATISPKIQRIELQVSLFNTEQGKVEAGITNMVFFNYPAKART
Nucleotide
Download Length: 387 bp
>NTDB_id=285515 CDG55_RS08110 WP_087535844.1 1392051..1392437(+) (xcpV) [Acinetobacter sp. WCHA45]
ATGAAGAAGATTAAAGCATTTACCCTGTTGGAAGTAATGGTTGCTTTAGCGATATTTGCTGTCGCTGCAATTGCATTAAC
AAAAATTGCCATGCAATATACACAATCTACATCGAGTGCGATTTTGCGAACAAAAGCACAGTTCGTTGCAATGAATGAAA
TTGCAATGATGGAAATGAATCAAGAATGGTTGGATGGAACGCAATCGAAACAGGTGACTTCTCAAGGCGAGACTTGGCAG
ATTGATAAAAAAGCACAGGCTACAATTAGCCCCAAAATACAACGTATCGAATTACAAGTAAGTTTATTTAATACTGAGCA
AGGTAAAGTTGAAGCGGGCATCACCAATATGGTGTTTTTTAATTATCCAGCAAAAGCTAGAACATGA
ATGAAGAAGATTAAAGCATTTACCCTGTTGGAAGTAATGGTTGCTTTAGCGATATTTGCTGTCGCTGCAATTGCATTAAC
AAAAATTGCCATGCAATATACACAATCTACATCGAGTGCGATTTTGCGAACAAAAGCACAGTTCGTTGCAATGAATGAAA
TTGCAATGATGGAAATGAATCAAGAATGGTTGGATGGAACGCAATCGAAACAGGTGACTTCTCAAGGCGAGACTTGGCAG
ATTGATAAAAAAGCACAGGCTACAATTAGCCCCAAAATACAACGTATCGAATTACAAGTAAGTTTATTTAATACTGAGCA
AGGTAAAGTTGAAGCGGGCATCACCAATATGGTGTTTTTTAATTATCCAGCAAAAGCTAGAACATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
80.8 |
97.656 |
0.789 |