Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C5Y81_RS13815 Genome accession   NZ_CP028470
Coordinates   2673335..2674000 (-) Length   221 a.a.
NCBI ID   WP_052997578.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IT4-R     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2668335..2679000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5Y81_RS13795 (C5Y81_13795) - 2668800..2668913 (-) 114 WP_072384844.1 hypothetical protein -
  C5Y81_RS13800 (C5Y81_13800) - 2669577..2671577 (-) 2001 WP_000776746.1 ABC transporter permease -
  C5Y81_RS13805 (C5Y81_13805) - 2671574..2672329 (-) 756 WP_000923768.1 ABC transporter ATP-binding protein -
  C5Y81_RS13810 (C5Y81_13810) braS 2672437..2673324 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  C5Y81_RS13815 (C5Y81_13815) braR 2673335..2674000 (-) 666 WP_052997578.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  C5Y81_RS13820 (C5Y81_13820) - 2674026..2674226 (-) 201 WP_000604723.1 hypothetical protein -
  C5Y81_RS13825 (C5Y81_13825) - 2674424..2675848 (+) 1425 WP_000953731.1 alkaline phosphatase -
  C5Y81_RS14510 - 2675918..2676028 (+) 111 WP_001791296.1 hypothetical protein -
  C5Y81_RS13835 (C5Y81_13835) - 2676131..2676586 (-) 456 WP_000106184.1 MarR family transcriptional regulator -
  C5Y81_RS13840 (C5Y81_13840) - 2676832..2677593 (-) 762 WP_000323451.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25463.55 Da        Isoelectric Point: 4.7961

>NTDB_id=285222 C5Y81_RS13815 WP_052997578.1 2673335..2674000(-) (braR) [Staphylococcus aureus strain IT4-R]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNSFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=285222 C5Y81_RS13815 WP_052997578.1 2673335..2674000(-) (braR) [Staphylococcus aureus strain IT4-R]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATAGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACGGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGACAATACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATTATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991

Multiple sequence alignment