Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   DA378_RS05685 Genome accession   NZ_CP028440
Coordinates   1278014..1278205 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain J7-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1273014..1283205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DA378_RS05660 - 1273370..1274356 (-) 987 WP_003155054.1 ABC transporter ATP-binding protein -
  DA378_RS05665 - 1274530..1275315 (-) 786 WP_003155055.1 DUF2268 domain-containing protein -
  DA378_RS05670 fabF 1275399..1276637 (-) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  DA378_RS05675 - 1276660..1277598 (-) 939 WP_003155057.1 beta-ketoacyl-ACP synthase III -
  DA378_RS05680 - 1277766..1277984 (+) 219 WP_003155059.1 hypothetical protein -
  DA378_RS05685 comZ 1278014..1278205 (-) 192 WP_003155061.1 ComZ family protein Regulator
  DA378_RS05690 med 1278218..1279171 (-) 954 WP_003155063.1 BMP family ABC transporter substrate-binding protein Regulator
  DA378_RS05695 - 1279261..1279827 (-) 567 WP_003155065.1 hypothetical protein -
  DA378_RS05700 - 1279910..1280644 (-) 735 WP_003155067.1 hypothetical protein -
  DA378_RS05710 - 1280905..1281090 (+) 186 WP_003155069.1 YjzD family protein -
  DA378_RS05715 - 1281126..1281305 (-) 180 WP_003155070.1 YjzC family protein -
  DA378_RS05720 argF 1281381..1282352 (-) 972 WP_003155071.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=284985 DA378_RS05685 WP_003155061.1 1278014..1278205(-) (comZ) [Bacillus velezensis strain J7-1]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=284985 DA378_RS05685 WP_003155061.1 1278014..1278205(-) (comZ) [Bacillus velezensis strain J7-1]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment