Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EGX82_RS11105 Genome accession   NZ_CP033822
Coordinates   2121914..2123647 (+) Length   577 a.a.
NCBI ID   WP_000647645.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain FDAARGOS_512     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2116914..2128647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX82_RS11085 (EGX82_11085) glyA 2117338..2118594 (+) 1257 WP_000575546.1 serine hydroxymethyltransferase -
  EGX82_RS11090 (EGX82_11090) - 2118599..2119576 (+) 978 WP_000968656.1 nucleoid-associated protein -
  EGX82_RS11095 (EGX82_11095) - 2119578..2120180 (+) 603 WP_000472260.1 lysozyme family protein -
  EGX82_RS11100 (EGX82_11100) - 2120192..2121913 (+) 1722 WP_000826938.1 ABC transporter ATP-binding protein -
  EGX82_RS11105 (EGX82_11105) rcrQ 2121914..2123647 (+) 1734 WP_000647645.1 ABC transporter ATP-binding protein Regulator
  EGX82_RS11110 (EGX82_11110) - 2123661..2123858 (+) 198 WP_000746856.1 hypothetical protein -
  EGX82_RS11115 (EGX82_11115) - 2123911..2125629 (-) 1719 WP_000222544.1 phospho-sugar mutase -
  EGX82_RS11120 (EGX82_11120) - 2125739..2126311 (-) 573 WP_000728785.1 ECF transporter S component -
  EGX82_RS11125 (EGX82_11125) coaC 2126357..2126899 (-) 543 WP_000595815.1 phosphopantothenoylcysteine decarboxylase -
  EGX82_RS11130 (EGX82_11130) coaB 2126892..2127578 (-) 687 WP_032456993.1 phosphopantothenate--cysteine ligase -
  EGX82_RS11135 (EGX82_11135) - 2127732..2128568 (+) 837 WP_000455162.1 lipoate--protein ligase family protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 64227.94 Da        Isoelectric Point: 8.2055

>NTDB_id=284964 EGX82_RS11105 WP_000647645.1 2121914..2123647(+) (rcrQ) [Streptococcus agalactiae strain FDAARGOS_512]
MKASHPKKIQKKLVQDLLSKKSLVGMALLGTVVQVCLTVYLPVLIGQAVDVVLSPHSMILLLPIMWKMVAVILANTIIQW
INPLLYNRLIFHYVASLRKAVMEKLNLLPIAYLDKRGIGDLISRVTTDTEQLSNGLLMVFNQFFVGLLTILVTIFSMAKI
DLLMLFLVLFLTPLSLFLARFIAKKSYHLYQNQTASRGRQTQFIEEMVSQESLIQAFSAQEESSDHFRTINQEYANFSQS
AIFYSSTVNPSTRFINSLIYGFLAGIGALRIMSGAFSVGQLITFLNYVNQYTKPFNDISSVLSEMQSALACAERLYSILE
ESSPNITGTEKLDSSTVKGQIDFKNVIFGYNKSKPLLNGINLHIPAGAKVAIVGPTGAGKSTLINLLMRFYEVDGGNILL
DGKPITDYEPSQLRQEIGMVLQETWLKSATIHDNIAYANPKASRDEVIEAAKAANADFFIKQLPNGYDTYLEDAGDSLSQ
GQCQLLTIARIFLKLPRILILDEATSSIDTRTEVLVQEAFQMLMKGRTSFIIAHRLSTIQTADIILVMVSGEIVEVGNHS
ELMAQKGIYYQMQNAQK

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=284964 EGX82_RS11105 WP_000647645.1 2121914..2123647(+) (rcrQ) [Streptococcus agalactiae strain FDAARGOS_512]
ATGAAAGCAAGTCATCCTAAAAAGATACAAAAAAAGCTTGTTCAAGATCTTCTTTCTAAAAAAAGCTTAGTAGGAATGGC
ATTATTAGGGACGGTAGTACAAGTTTGCCTCACTGTTTATTTGCCTGTTCTAATTGGACAGGCGGTAGACGTTGTATTAT
CGCCTCATTCTATGATATTATTGTTACCTATAATGTGGAAGATGGTTGCAGTTATTTTAGCAAATACTATTATTCAATGG
ATTAATCCTCTGCTCTATAACCGCTTAATTTTTCATTATGTTGCTTCTTTAAGAAAGGCTGTAATGGAAAAGTTGAATCT
ATTACCTATAGCTTACCTTGATAAACGTGGCATAGGTGACTTGATTAGTCGTGTGACTACCGATACGGAGCAATTATCAA
ATGGTTTATTAATGGTTTTTAACCAGTTCTTTGTTGGTTTATTAACTATTCTAGTTACTATTTTTAGTATGGCAAAGATT
GATTTATTAATGCTTTTTTTGGTATTATTTCTGACGCCTTTATCACTCTTTCTAGCCCGCTTTATTGCTAAAAAGAGTTA
TCACTTATATCAAAATCAAACGGCATCACGAGGACGACAAACTCAATTCATTGAAGAGATGGTGAGTCAAGAAAGCCTTA
TTCAAGCATTCAGTGCGCAAGAAGAAAGTAGTGATCATTTTAGGACTATTAATCAAGAGTATGCTAACTTTTCTCAATCA
GCAATTTTTTATTCTTCAACTGTCAATCCATCAACCCGATTTATCAATAGTTTGATTTATGGCTTCTTAGCAGGGATTGG
TGCCCTTCGTATTATGTCAGGTGCTTTTAGTGTTGGTCAATTAATCACTTTCTTAAATTATGTCAATCAATATACTAAGC
CATTTAATGACATCTCTTCCGTCCTGTCTGAGATGCAAAGTGCTCTGGCTTGTGCAGAACGCCTTTACTCTATTTTAGAA
GAATCGTCACCAAATATAACAGGTACAGAAAAACTTGATTCATCAACGGTCAAAGGTCAAATCGATTTTAAAAACGTTAT
TTTTGGTTATAATAAATCAAAACCACTATTGAATGGTATTAATTTACACATTCCAGCAGGAGCTAAGGTCGCTATTGTAG
GACCAACAGGTGCTGGGAAGTCTACTTTAATCAATTTATTAATGCGTTTCTATGAAGTTGACGGGGGAAATATCCTTTTA
GATGGTAAGCCTATTACTGATTATGAGCCATCACAATTAAGGCAAGAAATTGGAATGGTATTACAAGAAACGTGGTTAAA
AAGTGCTACGATTCACGATAACATTGCATATGCCAATCCTAAAGCTAGCCGTGACGAAGTGATAGAGGCTGCAAAAGCAG
CTAATGCAGATTTCTTTATCAAACAATTACCGAATGGATATGATACGTATTTAGAAGATGCTGGAGACTCGTTATCACAG
GGGCAGTGTCAGCTATTGACAATTGCTCGTATTTTTCTTAAATTACCTAGAATATTGATATTAGATGAGGCAACATCGTC
TATAGATACTCGTACTGAAGTTCTTGTTCAAGAAGCATTCCAAATGTTGATGAAGGGGAGAACAAGCTTTATTATTGCAC
ATCGCTTATCTACCATTCAAACAGCAGATATTATTTTAGTTATGGTATCTGGTGAAATTGTAGAAGTGGGTAACCACTCT
GAATTAATGGCTCAAAAAGGTATTTATTATCAAATGCAAAATGCACAAAAGTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(357-506)

ABC transporter transmembrane region (ABC_membrane)

(25-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

36.814

97.92

0.36

Multiple sequence alignment