Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   EGX80_RS02355 Genome accession   NZ_CP033815
Coordinates   405273..405914 (-) Length   213 a.a.
NCBI ID   WP_002983671.1    Uniprot ID   A0A0H2UW05
Organism   Streptococcus pyogenes strain FDAARGOS_514     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 400273..410914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX80_RS02330 (EGX80_02330) - 400361..401685 (-) 1325 Protein_453 DEAD/DEAH box helicase -
  EGX80_RS02335 (EGX80_02335) - 401740..402372 (+) 633 WP_011106658.1 YigZ family protein -
  EGX80_RS02340 (EGX80_02340) cysK 402500..403441 (+) 942 WP_002991877.1 cysteine synthase A -
  EGX80_RS02345 (EGX80_02345) - 403459..403836 (-) 378 WP_002991882.1 S1 RNA-binding domain-containing protein -
  EGX80_RS02350 (EGX80_02350) - 403836..405236 (-) 1401 WP_011054832.1 Cof-type HAD-IIB family hydrolase -
  EGX80_RS02355 (EGX80_02355) vraR 405273..405914 (-) 642 WP_002983671.1 response regulator transcription factor Regulator
  EGX80_RS02360 (EGX80_02360) - 405907..406911 (-) 1005 WP_002991890.1 sensor histidine kinase -
  EGX80_RS02365 (EGX80_02365) liaF 406908..407600 (-) 693 WP_011054833.1 cell wall-active antibiotics response protein LiaF -
  EGX80_RS02370 (EGX80_02370) pknB 407723..409621 (-) 1899 WP_149031610.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  EGX80_RS02375 (EGX80_02375) - 409618..410358 (-) 741 WP_002983660.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 23751.43 Da        Isoelectric Point: 5.1641

>NTDB_id=284778 EGX80_RS02355 WP_002983671.1 405273..405914(-) (vraR) [Streptococcus pyogenes strain FDAARGOS_514]
MSKIKVILVDDHEMVRMGLKSFLNLQADIDVVGEASNGREGVDLALALKPDVLVMDLVMPELGGVEATLEVLKKWKEAKV
LVLTSYLDNEKIYPVIDAGAKGYMLKTSSAAEILNAIRKVSKGELAIETEVDKKIKAHDQHPDLHEELTAREYDILHLLA
KGYDNQTIADELFISLKTVKTHVSNILAKLEVDDRTQAVVYAFRHHLVPQDDN

Nucleotide


Download         Length: 642 bp        

>NTDB_id=284778 EGX80_RS02355 WP_002983671.1 405273..405914(-) (vraR) [Streptococcus pyogenes strain FDAARGOS_514]
ATGAGTAAGATAAAAGTGATATTGGTCGATGATCATGAAATGGTCCGCATGGGACTCAAGAGTTTTTTGAATTTACAAGC
TGATATTGATGTCGTTGGTGAGGCCTCTAATGGACGTGAAGGGGTTGATTTGGCATTGGCTTTGAAGCCAGATGTTTTGG
TTATGGATCTAGTGATGCCAGAGTTAGGCGGTGTTGAGGCAACTTTAGAAGTCCTAAAAAAATGGAAAGAGGCTAAGGTA
CTTGTGTTAACTTCCTATCTAGATAATGAAAAGATATACCCTGTCATTGATGCAGGAGCGAAGGGTTATATGTTAAAAAC
ATCGAGTGCGGCTGAAATTTTAAATGCCATTCGCAAGGTTTCAAAGGGAGAGTTAGCTATTGAAACAGAAGTTGACAAAA
AAATTAAGGCGCATGATCAACACCCTGACTTGCATGAGGAACTAACAGCGCGTGAGTATGATATTTTACACCTTTTAGCT
AAAGGGTATGATAATCAGACCATTGCTGATGAACTCTTTATTTCCTTAAAAACCGTCAAAACACATGTGTCCAATATTCT
AGCCAAGTTAGAAGTTGATGACCGAACCCAAGCGGTTGTCTATGCTTTTCGACACCATTTAGTCCCCCAAGACGATAATT
AA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-118)

Bacterial regulatory proteins, luxR family (GerE)

(148-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UW05

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

52.913

96.714

0.512
  degU Bacillus subtilis subsp. subtilis str. 168

36.283

100

0.385