Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SK637_RS08570 Genome accession   NZ_CP028415
Coordinates   1730595..1731854 (-) Length   419 a.a.
NCBI ID   WP_033689426.1    Uniprot ID   -
Organism   Streptococcus mitis strain SK637     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1725595..1736854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SK637_RS08560 (SK637_01672) bglA 1727251..1728630 (-) 1380 WP_033689424.1 6-phospho-beta-glucosidase -
  SK637_RS08565 (SK637_01673) - 1728729..1730582 (-) 1854 WP_033689425.1 proline--tRNA ligase -
  SK637_RS08570 (SK637_01674) eeP 1730595..1731854 (-) 1260 WP_033689426.1 RIP metalloprotease RseP Regulator
  SK637_RS08575 (SK637_01675) - 1731876..1732679 (-) 804 WP_033689427.1 phosphatidate cytidylyltransferase -
  SK637_RS08580 (SK637_01676) - 1732688..1733446 (-) 759 WP_000466722.1 isoprenyl transferase -
  SK637_RS08590 (SK637_01677) - 1733791..1734363 (-) 573 WP_033689429.1 nucleotidyltransferase family protein -
  SK637_RS08595 (SK637_01678) ruvB 1734344..1735342 (-) 999 WP_080710563.1 Holliday junction branch migration DNA helicase RuvB -
  SK637_RS08600 - 1735476..1735568 (+) 93 WP_000970296.1 type I toxin-antitoxin system Fst family toxin -
  SK637_RS08605 (SK637_01679) - 1736150..1736566 (-) 417 WP_033689432.1 GNAT family N-acetyltransferase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45910.48 Da        Isoelectric Point: 5.4688

>NTDB_id=284732 SK637_RS08570 WP_033689426.1 1730595..1731854(-) (eeP) [Streptococcus mitis strain SK637]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLTDDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFAVDHDATVVEADGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWILIFMQGGVRDVDTNQFHVMPQGALAKVGVSETAQITKIGSHEISNWESLIQ
AVESETKDKTAPTLDVTISENGSDKQVTVTPEESQGRYLLGVQPGIKSDFLSMFVGGFTTAADSALRILSELKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENVLYFLAVISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=284732 SK637_RS08570 WP_033689426.1 1730595..1731854(-) (eeP) [Streptococcus mitis strain SK637]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTCGGGATTATTGTGGTGGTGCACGAGTTTGGCCACTTCTACTTTGCCAA
GAAATCAGGGATTCTAGTGCGTGAATTTGCCATTGGTATGGGACCCAAAATCTTTGCTCATATTGGCAAGGATGGAACGG
CCTATACCATTCGCATCTTGCCTCTGGGTGGTTATGTTCGCATGGCCGGTTGGGGTGATGATACAACTGAAATCAAGACA
GGGACTCCTGTTAGTTTGACGCTTACTGATGATGGTAAGGTTAAACGCATCAATCTCTCAGGTAAAAAATTGGATCAAAC
AGCTCTTCCTATGCAGGTGACTCAGTTTGATTTTGAAGACAAGCTTTTCATCAAGGGATTGGTTCTGGAAGAAGAAAAAA
CATTTGCAGTGGATCACGATGCAACGGTTGTGGAAGCAGATGGTACTGAGGTTCGGATTGCACCTTTAGATGTTCAATAT
CAAAATGCGACTATCTGGGGCAAACTGATTACCAACTTTGCAGGCCCTATGAACAACTTTATCTTAGGGGTTGTTGTTTT
CTGGATTTTAATCTTCATGCAGGGTGGTGTTAGAGATGTTGATACCAATCAGTTTCATGTCATGCCTCAAGGTGCTTTGG
CTAAGGTAGGAGTGTCAGAAACGGCCCAGATTACTAAGATTGGCTCACATGAGATTAGCAACTGGGAAAGTTTGATTCAG
GCTGTGGAATCAGAAACCAAAGATAAGACAGCCCCGACCTTGGATGTGACTATTTCTGAAAATGGTAGTGACAAACAAGT
CACTGTTACTCCGGAAGAAAGTCAAGGTCGATATCTTCTAGGTGTTCAACCGGGGATTAAGTCGGACTTTCTATCCATGT
TTGTAGGTGGATTTACAACTGCAGCCGACTCGGCTCTCCGAATTCTCTCAGAGCTGAAAAATCTGATTTTCCAACCGGAT
TTGAACAAGCTAGGTGGACCTGTTGCTATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAGAATGTCTTGTA
CTTCTTGGCAGTGATTTCCATCAATATTGGGATTTTTAATCTTATTCCGATTCCAGCCCTGGATGGTGGTAAGATTGTGC
TCAATATCCTAGAAGCCATCCGCCGCAAACCATTGAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACTTGGAATGACATCATGCGACTCTTTTTTAGATAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

64.048

100

0.642

  eeP Streptococcus thermophilus LMG 18311

63.81

100

0.64


Multiple sequence alignment