Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SM12261_RS08385 Genome accession   NZ_CP028414
Coordinates   1671115..1672374 (-) Length   419 a.a.
NCBI ID   WP_000900673.1    Uniprot ID   -
Organism   Streptococcus mitis NCTC 12261     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1666115..1677374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SM12261_RS08375 (SM12261_1616) bglA 1667771..1669150 (-) 1380 WP_000943500.1 6-phospho-beta-glucosidase -
  SM12261_RS08380 (SM12261_1617) - 1669249..1671102 (-) 1854 WP_000814058.1 proline--tRNA ligase -
  SM12261_RS08385 (SM12261_1618) eeP 1671115..1672374 (-) 1260 WP_000900673.1 RIP metalloprotease RseP Regulator
  SM12261_RS08390 (SM12261_1619) - 1672396..1673199 (-) 804 WP_000189860.1 phosphatidate cytidylyltransferase -
  SM12261_RS08395 (SM12261_1620) - 1673208..1673966 (-) 759 WP_000466726.1 isoprenyl transferase -
  SM12261_RS08405 (SM12261_1621) - 1674313..1674885 (-) 573 WP_001028387.1 nucleotidyltransferase family protein -
  SM12261_RS08410 (SM12261_1622) ruvB 1674866..1675864 (-) 999 WP_004239104.1 Holliday junction branch migration DNA helicase RuvB -
  SM12261_RS08415 - 1675998..1676090 (+) 93 WP_000970293.1 type I toxin-antitoxin system Fst family toxin -
  SM12261_RS08420 (SM12261_1623) - 1676898..1677314 (-) 417 WP_000628389.1 GNAT family N-acetyltransferase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45948.62 Da        Isoelectric Point: 5.7162

>NTDB_id=284661 SM12261_RS08385 WP_000900673.1 1671115..1672374(-) (eeP) [Streptococcus mitis NCTC 12261]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLTDDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFAVDHDATVVEADGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWILIFMQGGVRDVDTNQFHIMPQGALAKVGVPETAQITKIGSHEVSNWESLIQ
AVESETKDKTAPTLDVTISEKGSDKQVTVTPEESQGRYLLGVQPGIKSDFVSMFVGGFTTAVDSALRILSDLKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENVLYFLAIISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=284661 SM12261_RS08385 WP_000900673.1 1671115..1672374(-) (eeP) [Streptococcus mitis NCTC 12261]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTTGGGATTATTGTAGTGGTGCACGAGTTCGGACACTTCTACTTTGCCAA
GAAATCAGGGATTCTAGTGCGTGAATTTGCCATTGGCATGGGACCCAAGATCTTTGCTCATATTGGCAAGGATGGAACGG
CCTATACCATTCGAATCTTGCCTCTGGGTGGCTATGTTCGCATGGCCGGTTGGGGTGATGATACAACTGAAATTAAGACA
GGAACTCCTGTCAGTTTGACCCTTACTGATGATGGTAAGGTTAAACGCATCAATCTTTCAGGTAAAAAATTAGATCAAAC
AGCCCTCCCTATGCAGGTGACCCAGTTTGATTTTGAAGACAAGCTCTTTATCAAGGGCTTGGTTCTGGAAGAAGAAAAAA
CATTTGCAGTAGATCACGATGCAACGGTTGTGGAAGCAGATGGAACTGAGGTTCGAATTGCTCCTTTGGATGTGCAATAT
CAAAATGCGACTATCTGGGGGAAACTGATTACTAACTTTGCAGGTCCTATGAACAACTTTATCTTAGGTGTCGTTGTTTT
CTGGATTTTAATCTTTATGCAGGGTGGTGTCAGAGATGTCGATACCAACCAGTTCCATATTATGCCTCAAGGGGCTTTGG
CTAAGGTAGGAGTACCAGAAACGGCACAGATTACCAAGATTGGTTCACATGAGGTTAGCAACTGGGAAAGCTTGATTCAA
GCTGTGGAATCAGAAACCAAAGATAAGACGGCCCCGACCTTGGATGTGACTATTTCTGAAAAGGGGAGTGACAAACAAGT
CACTGTTACTCCGGAAGAAAGTCAAGGCCGTTACCTTCTAGGTGTTCAACCGGGGATTAAGTCAGATTTTGTATCTATGT
TTGTAGGTGGTTTTACAACTGCTGTTGACTCGGCCCTCCGAATTCTATCAGATCTGAAAAATCTGATTTTCCAACCGGAT
TTGAACAAACTAGGTGGACCTGTTGCCATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAGAATGTCTTGTA
CTTCTTGGCAATTATTTCCATCAATATTGGGATTTTTAATCTTATTCCGATTCCAGCCCTGGATGGTGGTAAGATTGTGC
TCAATATCCTAGAAGCTATCCGCCGCAAACCATTGAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACCTGGAATGACATCATGCGACTCTTTTTTAGATAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.81

100

0.64

  eeP Streptococcus thermophilus LMG 18311

63.571

100

0.637


Multiple sequence alignment