Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   EGX83_RS16570 Genome accession   NZ_CP033768
Coordinates   3455705..3456340 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain FDAARGOS_533     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3450705..3461340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX83_RS16555 (EGX83_16550) - 3451492..3452676 (+) 1185 WP_000939107.1 S41 family peptidase -
  EGX83_RS16560 (EGX83_16555) - 3452680..3454101 (-) 1422 WP_031963979.1 sigma-54-dependent transcriptional regulator -
  EGX83_RS16565 (EGX83_16560) - 3454126..3455694 (-) 1569 Protein_3207 sensor histidine kinase -
  EGX83_RS16570 (EGX83_16565) letA 3455705..3456340 (-) 636 WP_000633799.1 response regulator Regulator
  EGX83_RS16575 (EGX83_16570) pbpG 3456553..3457599 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  EGX83_RS16580 (EGX83_16575) thrC 3457706..3458845 (-) 1140 WP_000063593.1 threonine synthase -
  EGX83_RS16585 (EGX83_16580) - 3458901..3460202 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  EGX83_RS16590 (EGX83_16585) - 3460447..3461262 (-) 816 WP_123793885.1 DsbC family protein -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=284641 EGX83_RS16570 WP_000633799.1 3455705..3456340(-) (letA) [Acinetobacter baumannii strain FDAARGOS_533]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=284641 EGX83_RS16570 WP_000633799.1 3455705..3456340(-) (letA) [Acinetobacter baumannii strain FDAARGOS_533]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCCGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment